Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AL391813.1-201ENST00000603098 260 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC123912.5-201ENST00000605470 343 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC004775.1-201ENST00000607389 753 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 MIR6078-201ENST00000611069 100 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC018926.3-201ENST00000618841 406 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC090517.3-201ENST00000625170 141 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 MTND5P30-201ENST00000452896 1731 ntBASIC0.78□□□□□ -2.29
AP4S1Q9Y587 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
AP4S1Q9Y587 RPL17P50-201ENST00000396131 546 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 RPL37P10-201ENST00000412884 288 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.77□□□□□ -2.29
AP4S1Q9Y587 MED14P1-201ENST00000430517 648 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 AC245047.4-201ENST00000433189 144 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 ARL5AP3-201ENST00000439327 386 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.77□□□□□ -2.29
AP4S1Q9Y587 RNU6-902P-201ENST00000517212 91 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.77□□□□□ -2.29
AP4S1Q9Y587 AL731537.2-201ENST00000561565 951 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 AC068722.2-201ENST00000618734 544 ntBASIC0.77□□□□□ -2.29
AP4S1Q9Y587 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
AP4S1Q9Y587 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
AP4S1Q9Y587 SNORA17.3-201ENST00000391159 129 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 AL449283.1-202ENST00000418249 604 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 AC233981.1-201ENST00000423224 461 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 AL590383.1-201ENST00000428602 75 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 FABP5P14-201ENST00000437273 393 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 PIGFP3-201ENST00000441918 722 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.76□□□□□ -2.29
AP4S1Q9Y587 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.76□□□□□ -2.29
AP4S1Q9Y587 RNA5SP112-201ENST00000515937 99 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 AC087441.2-201ENST00000529141 262 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 AC138473.1-201ENST00000605717 526 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 AL391813.2-201ENST00000609113 322 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 AL391597.1-201ENST00000618707 694 ntBASIC0.76□□□□□ -2.29
AP4S1Q9Y587 ZNF680P1-201ENST00000436625 1469 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 SNORD82-201ENST00000365530 70 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 RNU6-444P-201ENST00000383988 108 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 RNU6-439P-201ENST00000384188 106 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 MIR532-201ENST00000385025 91 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
AP4S1Q9Y587 RNU2-36P-201ENST00000410361 191 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AP1B1P2-201ENST00000416196 106 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 UBE2V1P4-201ENST00000425374 344 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 RPL26P6-201ENST00000440913 438 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 C1DP3-201ENST00000455013 423 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.75□□□□□ -2.29
AP4S1Q9Y587 SNORA59A-201ENST00000459326 152 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AC006390.1-201ENST00000508068 283 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AC090115.3-201ENST00000553218 849 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AC007151.1-201ENST00000572774 483 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AP005136.1-201ENST00000579765 429 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.75□□□□□ -2.29
AP4S1Q9Y587 U6.107-201ENST00000637108 79 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 ZNF663P-202ENST00000641770 1131 ntBASIC0.75□□□□□ -2.29
AP4S1Q9Y587 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 SNORA25B-201ENST00000365507 128 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 SNORA70.7-201ENST00000384159 133 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AL160275.3-201ENST00000423876 471 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC008850.1-201ENST00000427546 362 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 USP9YP24-201ENST00000434374 697 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AL135790.2-201ENST00000437701 267 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC245517.4-201ENST00000448601 281 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 ARPC3P5-201ENST00000448802 534 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC018868.1-201ENST00000491307 315 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 CBX3P8-201ENST00000532412 525 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC005832.3-201ENST00000537929 631 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 NIFKP6-201ENST00000598115 845 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC010900.2-201ENST00000604508 210 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC008945.2-201ENST00000606056 604 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 AL109659.3-201ENST00000624985 950 ntBASIC0.74□□□□□ -2.29
AP4S1Q9Y587 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
AP4S1Q9Y587 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.73□□□□□ -2.29
AP4S1Q9Y587 RNA5SP213-201ENST00000391031 106 ntBASIC0.73□□□□□ -2.29
AP4S1Q9Y587 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
AP4S1Q9Y587 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.73□□□□□ -2.29
AP4S1Q9Y587 BTF3P4-201ENST00000418852 495 ntBASIC0.73□□□□□ -2.29
AP4S1Q9Y587 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.73□□□□□ -2.29
AP4S1Q9Y587 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms