Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC018630.2-202ENST00000422992 927 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 AL512637.2-201ENST00000431287 1256 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 UBE2V2P3-201ENST00000433562 437 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 AL714022.1-201ENST00000439897 151 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 AC116337.2-201ENST00000477662 156 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 RPL31P41-201ENST00000477967 372 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 HMGB1P14-201ENST00000557424 591 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 AC079148.1-201ENST00000565944 819 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 MIR5571-201ENST00000577998 113 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 AC092140.2-201ENST00000618027 521 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 UCA1.1-201ENST00000620952 75 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 AC080100.1-201ENST00000624239 5356 ntBASIC1.3□□□□□ -2.2
PHRF1Q9P1Y6 SNORA38-201ENST00000363946 132 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 RNU11-5P-201ENST00000391216 129 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC022447.3-201ENST00000506865 495 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC011260.1-201ENST00000578420 472 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 BPTFP1-201ENST00000579209 492 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC105245.1-201ENST00000581934 244 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC090616.3-201ENST00000582184 217 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC103810.9-201ENST00000606688 112 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC107214.2-201ENST00000608204 634 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC005332.10-201ENST00000612725 619 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC079395.3-201ENST00000615161 484 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 FRG1HP-204ENST00000617940 757 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 ARL2BPP3-201ENST00000421226 480 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AL356867.1-201ENST00000429623 299 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC002542.1-201ENST00000440683 193 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 BTF3P12-201ENST00000519620 469 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 CR383656.7-201ENST00000548164 174 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 AC004852.3-201ENST00000614131 326 ntBASIC1.29□□□□□ -2.2
PHRF1Q9P1Y6 TEX21P-201ENST00000447107 1476 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 Y_RNA.258-201ENST00000364613 105 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 MIR767-201ENST00000390228 109 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 UBE2V1P11-201ENST00000411559 285 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 MTND4P24-201ENST00000424002 397 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AL035410.1-201ENST00000427409 427 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 RPL31P54-201ENST00000429803 370 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AC092170.1-201ENST00000440211 356 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 CABYRP1-201ENST00000465493 1045 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 MIR4698-201ENST00000577795 80 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AL627230.6-201ENST00000611129 280 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 MIR6857-201ENST00000613267 93 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 SDR42E1P2-201ENST00000614861 481 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 SDR42E1P4-201ENST00000620894 481 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AC091925.2-201ENST00000625059 256 ntBASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.28□□□□□ -2.2
PHRF1Q9P1Y6 RNU1-78P-201ENST00000391248 165 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AC093422.3-201ENST00000428506 305 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AC092573.2-201ENST00000434546 243 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 OSTCP8-201ENST00000445117 448 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 SNORD97-201ENST00000459187 142 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AC078857.1-201ENST00000469870 667 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 RNU5A-7P-201ENST00000515979 116 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 RNA5SP330-201ENST00000517096 96 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 DEFB108E-201ENST00000524692 240 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 MTCYBP27-201ENST00000555160 670 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AC008269.2-201ENST00000561915 1105 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 GAS5-AS1-201ENST00000602767 694 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AC021749.1-201ENST00000604322 607 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 FAM71BP1-201ENST00000604431 523 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AP001033.2-201ENST00000609701 1003 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 SDAD1P2-201ENST00000441308 2028 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 AL137003.2-201ENST00000606924 2538 ntBASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
PHRF1Q9P1Y6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 MIR193B-201ENST00000384907 83 ntBASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 AC009296.1-201ENST00000443146 155 ntBASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 RPS29P28-201ENST00000446439 141 ntBASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 AC087588.1-201ENST00000462203 316 ntBASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 AC084024.2-201ENST00000503480 791 ntBASIC1.26□□□□□ -2.21
PHRF1Q9P1Y6 AC105313.1-201ENST00000509121 353 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms