Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC105137.2-201ENST00000569073 466 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 VN1R82P-201ENST00000601481 356 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC091152.3-201ENST00000604227 325 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 BCRP9-201ENST00000605312 388 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC010678.1-201ENST00000614118 713 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AL356596.1-201ENST00000624230 379 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC064859.1-201ENST00000624741 174 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 CTSLP2-204ENST00000629029 392 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 ADAM3A-203ENST00000461344 2157 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
KLHL28Q9NXS3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL596028.1-201ENST00000326971 197 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 RNA5SP289-201ENST00000362332 137 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 RNU6-1284P-201ENST00000363701 100 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 RNU6-512P-201ENST00000364438 103 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 SNORA67.4-201ENST00000384688 142 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL355497.1-201ENST00000406262 551 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 NANOGP5-201ENST00000424456 877 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AC104651.1-201ENST00000427559 735 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AC004854.1-201ENST00000440356 349 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 MTND5P30-201ENST00000452896 1731 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 RNA5SP402-201ENST00000517148 110 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 DEFB108A-201ENST00000530110 222 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AC068587.4-201ENST00000533893 186 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL512310.1-201ENST00000548639 172 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AC061975.8-201ENST00000587058 721 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL158042.1-201ENST00000605338 460 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 AL136313.1-201ENST00000624804 202 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 MIR1291-201ENST00000627649 87 ntBASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KLHL28Q9NXS3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 RNU6-433P-201ENST00000363216 104 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 RNA5SP125-201ENST00000364843 120 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 RNU1-51P-201ENST00000365345 176 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 RNU6-769P-201ENST00000384407 104 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC119751.3-201ENST00000399720 670 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AL161651.1-201ENST00000440882 223 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 USP9YP25-201ENST00000457708 443 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC080013.2-201ENST00000460866 323 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 KLF3P2-201ENST00000465138 268 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 RNU7-193P-201ENST00000516723 65 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AP003122.3-201ENST00000526316 255 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AP000889.2-201ENST00000532684 490 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 MIR544B-201ENST00000582372 78 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC024933.1-201ENST00000608472 348 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC087241.4-201ENST00000612441 480 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC104237.2-201ENST00000612456 443 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC011939.3-201ENST00000613686 466 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 MIR6715A-201ENST00000615929 79 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AP000484.1-201ENST00000620067 1252 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 AC025048.6-202ENST00000627667 438 ntBASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KLHL28Q9NXS3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 NACAP2-201ENST00000318548 624 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms