Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 PTGES3P4-201ENST00000426243 356 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 OR6C5P-201ENST00000452388 923 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AC108059.3-201ENST00000456388 214 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AP001324.2-201ENST00000461163 319 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AC139453.3-201ENST00000493276 369 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 RPF2P2-201ENST00000504693 896 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 RNA5SP112-201ENST00000515937 99 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 RNU4-29P-201ENST00000515943 174 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 SNORA31.3-201ENST00000516029 96 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 RNA5SP200-201ENST00000516360 103 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 RNU6-703P-201ENST00000516946 107 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AC068587.4-201ENST00000533893 186 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 LARP7P3-201ENST00000579888 337 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 VN1R82P-201ENST00000601481 356 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AC099654.9-201ENST00000637055 678 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 SNORA80A-201ENST00000363922 136 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 MIR620-201ENST00000385232 95 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 VPS26BP1-201ENST00000417155 755 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 ZNF90P2-204ENST00000419323 1075 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC003685.2-201ENST00000422795 395 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 SRIP2-201ENST00000428470 166 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 USP9YP24-201ENST00000434374 697 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 IPO7P1-201ENST00000442031 636 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 USP9YP17-201ENST00000444617 696 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AL591719.1-201ENST00000444669 744 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 FCF1P6-201ENST00000456841 595 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 RPL23AP41-201ENST00000484754 458 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC104090.1-201ENST00000506341 1171 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC118465.1-201ENST00000513820 1271 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC025755.1-201ENST00000521306 278 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC013828.2-201ENST00000532487 235 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AL133241.1-201ENST00000556832 487 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 ROCK1P1-201ENST00000573767 549 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 MIR544B-201ENST00000582372 78 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 MTCYBP22-201ENST00000603788 447 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AC009314.1-201ENST00000603871 304 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AP000484.1-201ENST00000620067 1252 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 CTSLP2-204ENST00000629029 392 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 U6.99-201ENST00000637524 83 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AL445984.1-201ENST00000637834 659 ntBASIC1.95□□□□□ -2.1
CLN6Q9NWW5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CLN6Q9NWW5 AL109809.4-201ENST00000603520 2185 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 RNU6-769P-201ENST00000384407 104 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 MIR221-201ENST00000385135 110 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 RNU6-1242P-201ENST00000391052 103 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 RNA5SP338-201ENST00000410495 85 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 PIGPP2-201ENST00000411569 458 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 RPS3AP44-201ENST00000425466 790 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC079804.2-201ENST00000490376 200 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 RNU7-193P-201ENST00000516723 65 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 EIF4BP1-201ENST00000554881 351 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC027176.1-201ENST00000560204 514 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC234778.2-201ENST00000566241 354 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 RNU4-5P-201ENST00000607255 135 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC091965.4-201ENST00000607691 587 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AL109620.1-201ENST00000618738 1197 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC009269.6-201ENST00000621778 588 ntBASIC1.94□□□□□ -2.1
CLN6Q9NWW5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
CLN6Q9NWW5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms