Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 UBE2L4-201ENST00000587688 464 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AP001269.3-201ENST00000588718 329 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 DPPA3P3-201ENST00000603842 430 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC069431.2-201ENST00000604149 1099 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC107075.1-201ENST00000613695 314 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AP001486.3-201ENST00000615334 372 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AL158801.5-201ENST00000623123 465 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 MTND4P1-201ENST00000457501 1466 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 OR56A5-201ENST00000340110 738 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 RN7SKP158-201ENST00000410453 326 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC083875.1-201ENST00000419509 405 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 ELOCP14-201ENST00000428070 331 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 UBE2FP3-201ENST00000436366 524 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC004383.1-201ENST00000438135 289 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 ELOCP7-201ENST00000439968 331 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 ELOCP30-201ENST00000447108 299 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 FTH1P25-201ENST00000447665 469 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 MTCO1P27-201ENST00000448269 226 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AL353705.4-201ENST00000449661 238 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 RPL37P6-201ENST00000460682 294 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 KLF3P2-201ENST00000465138 268 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC093809.1-201ENST00000509155 340 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC112206.4-201ENST00000515142 405 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 RNU6-927P-201ENST00000516199 100 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 RNA5SP165-201ENST00000517142 115 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC093012.1-202ENST00000549403 582 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 NACAP3-201ENST00000552100 481 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC007151.1-201ENST00000572774 483 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC024619.4-201ENST00000580924 316 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AL158050.2-201ENST00000605336 568 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AL121652.1-201ENST00000608851 448 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AL136981.2-201ENST00000617319 734 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
TREX1Q9NSU2 AC110491.1-201ENST00000562191 2010 ntBASIC1.96□□□□□ -2.09
TREX1Q9NSU2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 HSPE1P11-201ENST00000339579 310 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 RNU4-22P-201ENST00000411058 166 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 RNA5SP508-201ENST00000411327 119 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AL359704.1-201ENST00000411586 781 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 NDUFS5P4-201ENST00000412983 318 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC244035.1-201ENST00000430042 390 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 MICF-203ENST00000432679 129 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 MTND1P28-201ENST00000435623 950 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 MTATP6P30-201ENST00000443540 664 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC020550.1-201ENST00000447385 163 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 USP9YP10-201ENST00000454868 628 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC013267.1-201ENST00000458227 267 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 DYNLL1P5-201ENST00000467158 270 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 MTAPP1-201ENST00000489154 819 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 MIR892C-201ENST00000516410 77 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 SCARNA3-201ENST00000517097 143 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AL133153.1-201ENST00000557756 303 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC104984.5-201ENST00000586878 94 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 SNRPGP19-201ENST00000603826 189 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AL021997.1-201ENST00000605757 193 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AP000676.3-201ENST00000623299 569 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC091932.3-201ENST00000624223 323 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC025048.6-202ENST00000627667 438 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TREX1Q9NSU2 AC099786.3-201ENST00000565735 1410 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 MTND5P29-201ENST00000458676 1807 ntBASIC1.96□□□□□ -2.1
TREX1Q9NSU2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 RNU6-1167P-201ENST00000363227 94 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 RSL24D1P4-201ENST00000400938 484 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms