Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SCARNA15.2-201ENST00000516409 127 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 DUXAP1-201ENST00000556632 463 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AP001542.2-201ENST00000593141 364 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AC104763.2-201ENST00000604179 382 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AC116312.1-201ENST00000606841 314 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AL391813.2-201ENST00000609113 322 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 OR4G11P-202ENST00000642116 1414 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 SNORA62.1-201ENST00000364287 154 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 MIR135A2-201ENST00000384854 100 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 MIR1261-201ENST00000408659 82 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 RPS12P24-201ENST00000412619 387 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 UBE2V1P4-201ENST00000425374 344 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 ZNF863P-201ENST00000426746 417 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AL590233.1-201ENST00000430017 456 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AL512637.2-201ENST00000431287 1256 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AL591806.2-201ENST00000433122 173 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AL121890.1-201ENST00000435457 205 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 THAP5P1-201ENST00000439089 262 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AL691517.1-201ENST00000440833 1235 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC087441.2-201ENST00000529141 262 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC021646.1-201ENST00000605469 484 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC011374.2-201ENST00000607135 526 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AL355802.3-201ENST00000607571 545 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC016542.1-201ENST00000608259 493 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AL157834.3-201ENST00000615543 103 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 U1.36-201ENST00000620684 176 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 AC092608.3-201ENST00000625017 386 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CDC42SE2Q9NRR3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 SNORA25B-201ENST00000365507 128 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 MIR888-201ENST00000401186 77 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 SNORA11.2-201ENST00000408318 127 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 SNRPEP10-201ENST00000420249 274 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AL022238.1-201ENST00000442557 355 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 COX6CP18-201ENST00000448769 222 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 HMGN2P18-201ENST00000450680 270 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 RFC5P1-201ENST00000454419 874 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AC112492.4-201ENST00000456549 352 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AC087343.1-201ENST00000477341 475 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 RN7SL429P-201ENST00000479090 223 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 RN7SL489P-201ENST00000486185 223 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 RN7SL327P-201ENST00000488659 223 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AL049874.1-201ENST00000489560 388 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 HIGD1AP6-201ENST00000521833 279 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AC135279.1-201ENST00000543493 504 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 RN7SL853P-201ENST00000617250 223 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 AL118508.4-201ENST00000624142 1176 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 MTND5P9-201ENST00000503854 1755 ntBASIC0.69□□□□□ -2.3
CDC42SE2Q9NRR3 RNU6-884P-201ENST00000363889 107 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 RNU4-51P-201ENST00000364206 140 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 MIR514A1-201ENST00000385133 98 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 MIR561-201ENST00000385216 97 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 RNA5SP465-201ENST00000391195 109 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 ATP5F1P6-201ENST00000402768 767 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 AL139098.1-201ENST00000407291 389 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 RPL21P90-201ENST00000415692 466 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 BEND7P1-201ENST00000422058 457 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 RPL39P29-201ENST00000447779 157 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 AC117503.1-201ENST00000472241 394 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 RPS27P23-201ENST00000487608 251 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 AP005660.1-201ENST00000522972 293 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 HSPA8P13-201ENST00000523715 472 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 AP003497.1-201ENST00000528472 562 ntBASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE2Q9NRR3 AC093510.2-201ENST00000562820 896 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms