Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 FDX1P2-201ENST00000450769 375 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 HSPE1P6-201ENST00000479457 291 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 NDUFB4P9-201ENST00000511646 388 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RNU6-390P-201ENST00000516259 103 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RNU6-1178P-201ENST00000516674 107 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RNU6-840P-201ENST00000517275 65 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AP001646.1-201ENST00000527936 915 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC109635.3-201ENST00000529536 185 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC022080.3-201ENST00000544433 482 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC025678.1-201ENST00000567861 338 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC005951.2-201ENST00000576282 495 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC007621.1-201ENST00000604544 437 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC093788.1-201ENST00000609356 927 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 SDR42E1P2-201ENST00000614861 481 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC010133.1-201ENST00000615809 842 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 MIR1321-201ENST00000637766 79 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC118273.1-201ENST00000525324 3006 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 SDAD1P2-201ENST00000441308 2028 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC073343.1-201ENST00000328239 651 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RNU6-188P-201ENST00000364207 107 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 Y_RNA.381-201ENST00000365666 102 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RNU6-641P-201ENST00000384006 107 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RNU6-483P-201ENST00000384088 108 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RNU6-606P-201ENST00000384721 111 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL138827.1-201ENST00000402666 306 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 MIR1277-201ENST00000408536 78 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RNU2-39P-201ENST00000410604 198 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RAC1P6-201ENST00000423911 575 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC008850.1-201ENST00000427546 362 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 MTND1P2-201ENST00000430604 821 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RPL7P54-201ENST00000438336 674 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 GSTA11P-201ENST00000452866 669 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RNU6-420P-201ENST00000458780 107 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RPL9P32-201ENST00000464118 620 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC083798.1-201ENST00000472671 131 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RPL23AP11-201ENST00000475260 469 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC126389.1-201ENST00000477436 290 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC092989.1-201ENST00000481235 277 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 RN7SL432P-201ENST00000484057 298 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC026427.2-201ENST00000506228 536 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 GMPSP1-201ENST00000514075 579 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AP004242.1-201ENST00000533701 349 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL133241.1-201ENST00000556832 487 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL670379.6-201ENST00000603753 252 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL670379.11-201ENST00000604059 253 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC008162.1-201ENST00000604718 254 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL670379.1-201ENST00000604752 252 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL670379.5-201ENST00000605253 252 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL670379.12-201ENST00000605291 253 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL670379.8-201ENST00000605353 252 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AL670379.7-201ENST00000605823 252 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC008536.2-201ENST00000607284 349 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 AC093648.1-201ENST00000623546 606 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 GABPAP-201ENST00000419271 1356 ntBASIC2.94□□□□□ -1.94
SIX2Q9NPC8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SIX2Q9NPC8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 DEFB108F-201ENST00000344638 222 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 RNU5A-1-201ENST00000362698 116 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 SMIM11P1-201ENST00000369586 178 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 Y_RNA.453-201ENST00000384223 109 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 MIR454-201ENST00000390180 115 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 RNU6-1158P-201ENST00000391167 107 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AL512633.1-201ENST00000399931 655 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 MRPL50P2-201ENST00000416821 482 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 MTCO1P20-201ENST00000425366 358 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms