Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC096745.1-201ENST00000509945 370 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC008269.2-201ENST00000561915 1105 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AL136363.1-201ENST00000605349 337 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC093838.1-201ENST00000613014 469 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AP001486.3-201ENST00000615334 372 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 MIR6718-201ENST00000616153 80 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC139769.3-201ENST00000618383 175 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC091812.1-201ENST00000432235 1948 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CHD8Q9HCK8 AC092745.2-202ENST00000411880 369 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 ARL2BPP3-201ENST00000421226 480 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.66□□□□□ -2.3
CHD8Q9HCK8 RNF2P1-201ENST00000442955 1010 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.66□□□□□ -2.3
CHD8Q9HCK8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.66□□□□□ -2.3
CHD8Q9HCK8 AC090616.5-202ENST00000582111 297 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 SNORA1.3-201ENST00000384676 136 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 MIR150-201ENST00000385048 84 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 PTGES3P2-201ENST00000407942 482 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 NF1P3-201ENST00000457709 450 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 AC105914.1-201ENST00000511798 226 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.66□□□□□ -2.3
CHD8Q9HCK8 RN7SKP277-201ENST00000516895 283 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.66□□□□□ -2.3
CHD8Q9HCK8 CASP1P1-201ENST00000526345 212 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 HMGN1P30-201ENST00000589286 268 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.66□□□□□ -2.3
CHD8Q9HCK8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.66□□□□□ -2.3
CHD8Q9HCK8 MTND4P27-201ENST00000450813 1354 ntBASIC0.66□□□□□ -2.3
CHD8Q9HCK8 Y_RNA.447-201ENST00000384184 113 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 RNU6-193P-201ENST00000410977 107 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 VPS26BP1-201ENST00000417155 755 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 AC093155.1-201ENST00000440164 826 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 RPL21P103-201ENST00000479921 488 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 RPL30P11-201ENST00000495304 339 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 MTCYBP41-201ENST00000528913 1123 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 AP003327.1-201ENST00000529684 127 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 AC106028.5-201ENST00000610332 395 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 AC091304.6-201ENST00000619761 202 ntBASIC0.65□□□□□ -2.3
CHD8Q9HCK8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
CHD8Q9HCK8 CCT4P2-201ENST00000233836 1548 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 MIR627-201ENST00000384979 97 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 SNORA46.1-201ENST00000391069 153 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC092648.1-201ENST00000425870 423 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 MTCYBP29-201ENST00000436327 1006 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 RPL31P20-201ENST00000449593 360 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.65□□□□□ -2.31
CHD8Q9HCK8 OR5BM1P-201ENST00000512021 366 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AP003355.1-201ENST00000518956 587 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AP004371.1-201ENST00000525240 214 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 LINC00933-203ENST00000559812 219 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC136932.1-201ENST00000574771 208 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 MIR3117-201ENST00000584034 78 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC024060.1-201ENST00000607052 494 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC093788.1-201ENST00000609356 927 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC005332.10-201ENST00000612725 619 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 AC015726.3-201ENST00000624501 418 ntBASIC0.65□□□□□ -2.31
CHD8Q9HCK8 Y_RNA.100-201ENST00000363141 102 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 SNORD118-201ENST00000363593 134 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 UBE2FP3-201ENST00000436366 524 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 AL031183.1-201ENST00000457667 207 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 HMGB1P22-201ENST00000505315 124 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 RNU4-77P-201ENST00000516692 156 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.64□□□□□ -2.31
CHD8Q9HCK8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.64□□□□□ -2.31
CHD8Q9HCK8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.64□□□□□ -2.31
CHD8Q9HCK8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.64□□□□□ -2.31
CHD8Q9HCK8 AC018755.4-201ENST00000619715 454 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CHD8Q9HCK8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CHD8Q9HCK8 RNU6-1331P-201ENST00000363658 106 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 RNU6-1164P-201ENST00000364428 107 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 AL500527.1-201ENST00000448532 255 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 MTND2P8-201ENST00000450555 1025 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.64□□□□□ -2.31
CHD8Q9HCK8 AC068787.1-201ENST00000623908 691 ntBASIC0.64□□□□□ -2.31
CHD8Q9HCK8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CHD8Q9HCK8 RNU6-1293P-201ENST00000384077 107 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AL606495.1-201ENST00000422100 813 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.63□□□□□ -2.31
CHD8Q9HCK8 TMEM167AP1-201ENST00000423409 219 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.63□□□□□ -2.31
CHD8Q9HCK8 OR51AB1P-201ENST00000429046 620 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 PCNAP1-202ENST00000595299 752 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 RNU6-156P-201ENST00000621869 107 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CHD8Q9HCK8 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 RNU6-1197P-201ENST00000391183 107 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms