Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC018634.1-201ENST00000437554 401 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 RPL23AP35-201ENST00000451906 501 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC108059.3-201ENST00000456388 214 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC068781.1-201ENST00000488231 618 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC104090.1-201ENST00000506341 1171 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC114781.4-201ENST00000513707 639 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 MTCYBP20-201ENST00000524239 1129 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 CBX3P7-201ENST00000532876 502 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC121758.2-201ENST00000553271 193 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 VN1R82P-201ENST00000601481 356 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AL391001.1-201ENST00000602747 715 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 MTCYBP22-201ENST00000603788 447 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AL161423.1-201ENST00000613700 262 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AL160394.1-201ENST00000624765 724 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC243829.7-201ENST00000633081 225 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC104454.1-201ENST00000421341 1401 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 RNU6-525P-201ENST00000363685 104 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 RNU5A-8P-201ENST00000364102 114 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 RNU6-701P-201ENST00000384059 107 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 RNU6-636P-201ENST00000384598 107 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 USP9YP27-201ENST00000418455 438 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC092648.1-201ENST00000425870 423 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC004383.1-201ENST00000438135 289 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC124916.1-201ENST00000444020 547 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC092001.1-201ENST00000453012 261 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AL441985.1-201ENST00000457727 251 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 RPL22P13-201ENST00000493291 347 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AP006587.4-201ENST00000526053 529 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC013828.2-201ENST00000532487 235 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC009097.3-201ENST00000563557 1018 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AL138976.2-201ENST00000563989 694 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC136618.2-201ENST00000575091 400 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 ISCA1P3-201ENST00000577104 373 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC009269.6-201ENST00000621778 588 ntBASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRC40Q9H9A6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 RNU6-769P-201ENST00000384407 104 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 RNU6-1242P-201ENST00000391052 103 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 RN7SKP158-201ENST00000410453 326 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 MORF4L1P6-201ENST00000418771 268 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC093106.2-201ENST00000428212 385 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 MTND4P25-201ENST00000441039 533 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 USP9YP25-201ENST00000457708 443 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 RPL23AP41-201ENST00000484754 458 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 RNU6-143P-201ENST00000516942 93 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AP004247.1-201ENST00000531556 1289 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC068587.4-201ENST00000533893 186 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 RNU4-5P-201ENST00000607255 135 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC024581.2-201ENST00000619986 252 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AP000484.1-201ENST00000620067 1252 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC091965.5-201ENST00000624785 342 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 AL445984.1-201ENST00000637834 659 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 HSPA8P4-201ENST00000511877 1920 ntBASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
LRRC40Q9H9A6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.28□□□□□ -2.05
LRRC40Q9H9A6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.27□□□□□ -2.05
LRRC40Q9H9A6 USP9YP24-201ENST00000434374 697 ntBASIC2.27□□□□□ -2.05
LRRC40Q9H9A6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.27□□□□□ -2.05
LRRC40Q9H9A6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.27□□□□□ -2.05
LRRC40Q9H9A6 NEFMP1-201ENST00000443423 1006 ntBASIC2.27□□□□□ -2.05
LRRC40Q9H9A6 USP9YP17-201ENST00000444617 696 ntBASIC2.27□□□□□ -2.05
LRRC40Q9H9A6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.27□□□□□ -2.05
LRRC40Q9H9A6 AC004263.1-201ENST00000479327 332 ntBASIC2.27□□□□□ -2.05
LRRC40Q9H9A6 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms