Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MIR5680-201ENST00000577577 84 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AC006504.6-201ENST00000590142 199 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AC124303.1-201ENST00000605703 360 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AC006329.2-201ENST00000611491 394 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AL590099.1-201ENST00000615276 138 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 uc_338.12-201ENST00000616344 181 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AC006065.5-201ENST00000623427 349 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 MTND4LP32-201ENST00000636111 270 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AL138713.1-201ENST00000624026 2130 ntBASIC3.53□□□□□ -1.84
EBF3Q9H4W6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.53□□□□□ -1.84
EBF3Q9H4W6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.53□□□□□ -1.84
EBF3Q9H4W6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 MTCO1P24-201ENST00000515438 1558 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.22-201ENST00000362492 102 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 SNORA33.2-201ENST00000365413 134 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.367-201ENST00000365544 101 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 RNU6-574P-201ENST00000384265 107 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 MIR634-201ENST00000385208 97 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 RNA5SP56-201ENST00000410277 118 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC009161.1-201ENST00000417306 376 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC137499.1-201ENST00000427602 88 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 RPL7L1P10-201ENST00000427790 463 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 TIMM9P1-201ENST00000436122 256 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC093156.1-201ENST00000440382 670 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 IPO7P1-201ENST00000442031 636 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 PPP1R2P5-201ENST00000457256 603 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 RPL9P32-201ENST00000464118 620 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 GMFBP1-201ENST00000467831 427 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC027575.1-201ENST00000481064 460 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 RPL7P23-201ENST00000493874 747 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC020893.1-201ENST00000502452 580 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 PHBP14-201ENST00000512887 367 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 SNORD27.1-201ENST00000516319 72 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AL355836.1-201ENST00000555951 870 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 GLUD1P4-201ENST00000590914 418 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC006557.5-201ENST00000603126 811 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC136443.5-201ENST00000603741 370 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AL121992.2-201ENST00000606262 256 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AC093913.1-201ENST00000614178 329 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AL359757.2-201ENST00000624309 274 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 AL159972.1-201ENST00000625150 448 ntBASIC3.52□□□□□ -1.85
EBF3Q9H4W6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.52□□□□□ -1.85
EBF3Q9H4W6 PWAR6-201ENST00000552334 4618 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.31-201ENST00000362574 102 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RNA5SP374-201ENST00000362939 125 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RNU5A-8P-201ENST00000364102 114 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RNY1P12-201ENST00000364251 105 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RNU6-522P-201ENST00000364497 107 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RNA5SP235-201ENST00000365411 114 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 MIR19A-201ENST00000384878 82 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RNU6-821P-201ENST00000390995 107 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 SNORA48.5-201ENST00000391143 135 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RN7SKP111-201ENST00000410349 271 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 NCOR1P3-201ENST00000420479 303 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 HSPE1P1-201ENST00000421494 318 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC018630.2-202ENST00000422992 927 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC005517.2-201ENST00000424673 553 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 Z75741.1-201ENST00000446793 314 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AL590639.1-201ENST00000456484 337 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.631-201ENST00000459607 101 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 HMGB1P25-201ENST00000468402 607 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AL163540.1-201ENST00000485382 386 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC021146.2-201ENST00000504736 556 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RNU6-410P-201ENST00000517006 107 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.718-201ENST00000517110 102 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RN7SKP256-201ENST00000517201 314 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 RNU4-60P-201ENST00000517239 135 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AP003385.6-201ENST00000531603 374 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC093012.1-202ENST00000549403 582 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms