Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC007115.1-201ENST00000546853 234 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC124947.2-202ENST00000552735 133 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 SNRPGP18-201ENST00000553000 214 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC110760.3-201ENST00000598794 467 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 DUXAP4-201ENST00000603046 613 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC103710.2-201ENST00000609912 942 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 SDR42E1P2-201ENST00000614861 481 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 MIR6076-201ENST00000617521 113 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC064859.1-201ENST00000624741 174 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC233263.6-201ENST00000631132 1963 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 RNU1-91P-201ENST00000364746 163 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AC092047.1-201ENST00000424997 240 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AC244035.1-201ENST00000430042 390 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 USP12PX-201ENST00000432383 1057 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 BNIP3P2-201ENST00000441221 577 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 CBWD4P-201ENST00000445695 655 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AC020550.1-201ENST00000447385 163 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AC087241.2-201ENST00000535801 324 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 ACTR3BP3-201ENST00000565577 979 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 HMGN1P30-201ENST00000589286 268 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 Z94722.1-201ENST00000604328 474 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AC112191.3-201ENST00000604371 277 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 AL138880.2-201ENST00000616214 239 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 uc_338.12-201ENST00000616344 181 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 SNHG22-203ENST00000617833 660 ntBASIC2.66□□□□□ -1.98
RNF41Q9H4P4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RNF41Q9H4P4 RNU6-511P-201ENST00000363496 107 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 RNY4P16-201ENST00000364768 94 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AL513331.1-201ENST00000411908 397 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC129850.1-201ENST00000436203 508 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 RPL22P17-201ENST00000438729 315 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 MTND2P4-201ENST00000445034 1004 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 USP9YP12-201ENST00000450481 570 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC108059.3-201ENST00000456388 214 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 RNU6-1282P-201ENST00000516735 96 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 SNORA31.15-201ENST00000516771 132 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 DNAJC8P1-201ENST00000554535 372 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AMZ2P1-203ENST00000565833 850 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AP005136.1-201ENST00000579765 429 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 U73023.1-201ENST00000603134 700 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AP001981.2-201ENST00000603241 418 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC239868.4-201ENST00000608318 671 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC091304.9-201ENST00000612091 226 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 MTND1P37-201ENST00000636562 264 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 AC092104.1-201ENST00000497346 1441 ntBASIC2.65□□□□□ -1.99
RNF41Q9H4P4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.65□□□□□ -1.99
RNF41Q9H4P4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC007785.2-201ENST00000598627 1916 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 U3.4-201ENST00000363352 213 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 RNU6-1284P-201ENST00000363701 100 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 RNY3P13-201ENST00000365542 102 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 MIR221-201ENST00000385135 110 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 MIR325-201ENST00000385260 98 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 TMEM167AP1-201ENST00000423409 219 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms