Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 RNU7-66P-201ENST00000459469 62 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 RNU6-1208P-201ENST00000459588 107 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC004801.2-202ENST00000463559 283 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC091153.1-201ENST00000466297 402 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 HMGN2P13-201ENST00000476476 274 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 APOOP4-201ENST00000513530 597 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 RNU4-49P-201ENST00000516080 140 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM2Q9C040 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 PSMA3P-201ENST00000555485 635 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC005261.5-201ENST00000596280 355 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AL138889.2-201ENST00000603883 242 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 AP002826.1-201ENST00000608835 315 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC009570.1-201ENST00000609599 745 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC005344.1-201ENST00000613391 459 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM2Q9C040 FP236240.3-201ENST00000623061 327 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 CR392039.5-201ENST00000623201 510 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC022140.2-201ENST00000623500 188 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 AC112487.2-201ENST00000637950 304 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM2Q9C040 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM2Q9C040 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 AP004289.2-201ENST00000444413 1457 ntBASIC3.41□□□□□ -1.86
TRIM2Q9C040 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
TRIM2Q9C040 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM2Q9C040 ZNF285B-201ENST00000561698 1767 ntBASIC3.4□□□□□ -1.86
TRIM2Q9C040 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM2Q9C040 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM2Q9C040 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM2Q9C040 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
TRIM2Q9C040 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM2Q9C040 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM2Q9C040 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM2Q9C040 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM2Q9C040 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM2Q9C040 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM2Q9C040 RNU6-1167P-201ENST00000363227 94 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 Y_RNA.142-201ENST00000363491 102 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 U3.12-201ENST00000364498 214 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 SNORA4.3-201ENST00000365564 137 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 Y_RNA.529-201ENST00000384586 119 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 MIR30B-201ENST00000384850 88 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 MIR670-201ENST00000390142 98 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 SNORD70.1-201ENST00000391007 85 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 RNA5SP171-201ENST00000391071 115 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AL356432.1-201ENST00000405809 419 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM2Q9C040 YPEL5P1-201ENST00000419731 367 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 RPL35AP12-201ENST00000425362 338 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 MTCO3P46-201ENST00000425787 232 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM2Q9C040 HMGB1P27-201ENST00000431429 603 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM2Q9C040 NOTCH2P1-201ENST00000443481 624 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 MRPL50P4-201ENST00000446432 475 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 MTND1P11-201ENST00000456661 876 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AMD1P1-201ENST00000457220 922 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AC007547.1-201ENST00000462177 490 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AC087588.1-201ENST00000462203 316 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AC091885.1-201ENST00000506658 268 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 FAM206BP-201ENST00000510179 541 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AP001804.3-201ENST00000525146 880 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 OR11H5P-201ENST00000554039 926 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 MIR4742-201ENST00000581069 85 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM2Q9C040 AL161798.1-201ENST00000604630 131 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM2Q9C040 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM2Q9C040 AC012442.3-202ENST00000636742 206 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 MAPK10-362ENST00000641864 4484 ntBASIC3.4□□□□□ -1.87
TRIM2Q9C040 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM2Q9C040 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM2Q9C040 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM2Q9C040 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TRIM2Q9C040 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM2Q9C040 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
TRIM2Q9C040 AL079305.1-201ENST00000623159 3008 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
TRIM2Q9C040 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM2Q9C040 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TRIM2Q9C040 Y_RNA.184-201ENST00000363884 108 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 Y_RNA.263-201ENST00000364659 114 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM2Q9C040 AL391417.1-201ENST00000404100 426 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 AL591034.1-201ENST00000407447 340 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 RN7SKP156-201ENST00000410308 342 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 SNORA57.3-201ENST00000411095 141 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 BX682237.1-201ENST00000415016 335 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM2Q9C040 UBE2D3P2-201ENST00000424409 445 ntBASIC3.39□□□□□ -1.87
TRIM2Q9C040 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM2Q9C040 TRIAP1P1-201ENST00000427062 225 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms