Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR4529-201ENST00000578110 78 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 MIR4285-201ENST00000581001 85 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.68□□□□□ -2.14
TRIM4Q9C037 FTX_3.1-201ENST00000610451 147 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRIM4Q9C037 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRIM4Q9C037 Y_RNA.374-201ENST00000365606 101 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 RNU6-140P-201ENST00000384566 108 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC068050.1-201ENST00000394891 380 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AL109755.1-201ENST00000401791 649 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AL133264.1-201ENST00000407157 562 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 RN7SKP158-201ENST00000410453 326 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 RN7SKP51-201ENST00000410781 304 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC096649.2-201ENST00000416186 393 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC246680.2-201ENST00000422106 389 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AL358453.1-201ENST00000422522 250 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 PPP1R11P2-201ENST00000423543 382 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC234064.1-201ENST00000436312 247 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC016691.1-201ENST00000441321 413 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 RNFT1P2-201ENST00000443064 757 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC009474.2-201ENST00000451383 136 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 RPL12P25-201ENST00000455592 494 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 SUMO2P2-201ENST00000456482 255 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC013828.1-201ENST00000481845 158 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 ATP5EP1-201ENST00000510257 156 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AP005660.1-201ENST00000522972 293 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC118273.2-201ENST00000532092 465 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.67□□□□□ -2.14
TRIM4Q9C037 AP001429.1-201ENST00000602568 530 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC003001.2-201ENST00000616294 831 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC008443.7-201ENST00000622195 246 ntBASIC1.67□□□□□ -2.14
TRIM4Q9C037 AC010889.1-201ENST00000566193 2666 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 RNU6-392P-201ENST00000364926 101 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 SNORA23-201ENST00000365128 182 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRIM4Q9C037 SNORA67.5-201ENST00000391036 107 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 AC007742.1-201ENST00000425789 329 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 RPL30P4-201ENST00000429309 333 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 AC007919.1-201ENST00000429380 217 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 MED14P1-201ENST00000430517 648 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 ELOCP26-201ENST00000436067 329 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 HSPE1P21-201ENST00000438283 308 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 BX322784.1-201ENST00000455793 1077 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.66□□□□□ -2.14
TRIM4Q9C037 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM4Q9C037 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM4Q9C037 RNA5SP102-201ENST00000516865 106 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 HSPA8P13-201ENST00000523715 472 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.66□□□□□ -2.14
TRIM4Q9C037 AC004853.1-201ENST00000604902 698 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 AC007349.4-201ENST00000608114 532 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.66□□□□□ -2.14
TRIM4Q9C037 MKKS-204ENST00000639674 192 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 DBF4P1-201ENST00000412976 1892 ntBASIC1.66□□□□□ -2.14
TRIM4Q9C037 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRIM4Q9C037 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
TRIM4Q9C037 MTND4P23-201ENST00000447723 1363 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 RNU6-839P-201ENST00000363347 108 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 MIR888-201ENST00000401186 77 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 AL445183.3-201ENST00000414168 502 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 AC008850.1-201ENST00000427546 362 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 MTND4LP7-201ENST00000431728 294 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 AC244505.5-201ENST00000443639 207 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 VN1R10P-201ENST00000447106 875 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 RPS15AP17-201ENST00000470598 390 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 HMGN1P7-201ENST00000491722 313 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 OR5AL2P-201ENST00000532185 920 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM4Q9C037 MTCYBP23-201ENST00000558717 1102 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 LINC00933-203ENST00000559812 219 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 BNIP3P24-201ENST00000593398 557 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 AC069294.1-201ENST00000608397 350 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 AC004009.2-201ENST00000623016 728 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 AL590396.4-201ENST00000636779 956 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 U6.101-201ENST00000637707 76 ntBASIC1.65□□□□□ -2.15
TRIM4Q9C037 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM4Q9C037 MTND5P35-201ENST00000557537 1720 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 Z98749.2-208ENST00000381646 500 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 RPL23AP29-201ENST00000397284 453 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 RNU6-955P-201ENST00000410497 104 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 RPL23AP39-201ENST00000415533 405 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms