Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RPL21P1-201ENST00000399532 476 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 UBE2V1P15-201ENST00000407776 448 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 AL109913.1-201ENST00000421173 514 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 AIMP1P2-201ENST00000425294 312 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 SNRPFP4-201ENST00000456366 242 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 RPS15AP17-201ENST00000470598 390 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 SNORD19.2-201ENST00000516978 73 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 NRON-201ENST00000517270 370 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 MIR4287-201ENST00000579398 78 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 AC007229.1-201ENST00000590455 412 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 AC100814.1-201ENST00000606963 623 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 AC008443.7-201ENST00000622195 246 ntBASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UPF3BQ9BZI7 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 RNU5E-8P-201ENST00000363502 116 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 RNU6-884P-201ENST00000363889 107 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 RNY1P14-201ENST00000384426 108 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 RNU6-1300P-201ENST00000391046 108 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 MIR1276-201ENST00000408707 83 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 MTCO2P5-201ENST00000422621 426 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 MTCYBP32-201ENST00000427945 1084 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC093106.2-201ENST00000428212 385 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC004383.1-201ENST00000438135 289 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 RPL39P6-201ENST00000448289 150 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC005297.2-201ENST00000450430 606 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 PMCHL2-203ENST00000457791 237 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 RNU6-250P-201ENST00000516958 103 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 RNU6-1261P-201ENST00000517194 104 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC006518.2-201ENST00000542513 940 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AP001269.3-201ENST00000588718 329 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 MIR502-201ENST00000606349 86 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC068944.2-201ENST00000610373 403 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 AC005296.1-201ENST00000616145 209 ntBASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
UPF3BQ9BZI7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 MIR16-2-201ENST00000362117 81 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 RNA5SP125-201ENST00000364843 120 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 RN7SKP158-201ENST00000410453 326 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC027644.1-201ENST00000419595 298 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 SEPT14P24-201ENST00000447236 180 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 SNORD121B-201ENST00000458838 81 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 RNU6-775P-201ENST00000459318 96 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC069528.1-202ENST00000482888 637 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 SNORA31.6-201ENST00000516241 130 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 RNA5SP220-201ENST00000516298 104 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AP001542.1-201ENST00000591314 200 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 MTND4LP5-201ENST00000605152 292 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AL158211.4-201ENST00000606988 584 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC004908.2-201ENST00000609090 574 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 uc_338.14-201ENST00000613162 166 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC024581.2-201ENST00000619986 252 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AC103710.2-202ENST00000641454 2853 ntBASIC1.96□□□□□ -2.1
UPF3BQ9BZI7 AL356473.1-201ENST00000406203 1408 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 AL391987.6-201ENST00000305671 199 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 Y_RNA.112-201ENST00000363250 102 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 U8.14-201ENST00000390843 143 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 SNORD56-201ENST00000413522 71 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 RNU6-1102P-201ENST00000516149 96 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 ZNF971P-201ENST00000562068 1249 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 MIR4529-201ENST00000578110 78 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms