Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL591419.1-201ENST00000427423 339 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 RPL7P2-201ENST00000427639 268 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC004975.1-201ENST00000428733 208 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 CECR9-201ENST00000453421 199 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC103987.1-201ENST00000473394 348 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 HMGB3P15-201ENST00000507326 574 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 RNU4-49P-201ENST00000516080 140 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 RNA5SP208-201ENST00000516156 78 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 CASP1P1-201ENST00000526345 212 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC037471.2-201ENST00000564941 598 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC091135.1-201ENST00000585943 307 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC005498.1-201ENST00000592125 465 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC012119.1-201ENST00000603184 222 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 ATP1B3P1-201ENST00000605365 821 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 uc_338.5-201ENST00000611839 155 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AL391261.4-201ENST00000616012 481 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 SNORD39.4-201ENST00000620099 78 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 FP236240.3-201ENST00000623061 327 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 U6.98-201ENST00000637157 84 ntBASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM54Q9BYV2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM54Q9BYV2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM54Q9BYV2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM54Q9BYV2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM54Q9BYV2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 Y_RNA.414-201ENST00000384011 101 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNU6-1013P-201ENST00000384180 107 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNU6-1179P-201ENST00000384667 107 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 MIR578-201ENST00000384828 96 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AL391417.1-201ENST00000404100 426 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNU6-1025P-201ENST00000410629 104 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNU6-1148P-201ENST00000410992 104 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RPLP0P7-201ENST00000416050 667 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 HSPE1P1-201ENST00000421494 318 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC092047.1-201ENST00000424997 240 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RPS29P31-201ENST00000446147 164 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNA5SP310-201ENST00000459084 116 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC084357.1-201ENST00000473404 255 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 HMGB1P30-201ENST00000492455 606 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AP002812.1-201ENST00000495378 474 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC112206.3-201ENST00000514578 389 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 SNORA19.2-201ENST00000516013 114 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNU7-30P-201ENST00000516835 62 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNA5SP165-201ENST00000517142 115 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC090115.3-201ENST00000553218 849 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 MTCO3P23-201ENST00000561363 289 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC136601.2-201ENST00000604356 474 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC027309.3-201ENST00000623419 351 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 AC022336.2-201ENST00000568966 2538 ntBASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM54Q9BYV2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 ZNF807-201ENST00000328088 1707 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 Y_RNA.263-201ENST00000364659 114 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 Y_RNA.480-201ENST00000384364 102 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 RNU6-140P-201ENST00000384566 108 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 NDUFB4P5-201ENST00000415445 361 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 RPL23AP69-201ENST00000431134 458 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms