Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU7-23P-201ENST00000459465 62 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 AC104108.1-201ENST00000509930 412 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 AC103833.1-201ENST00000517442 172 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 MIR4299-201ENST00000577899 72 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 AL512605.2-201ENST00000592972 256 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 AC008555.8-201ENST00000623602 2168 ntBASIC1.25□□□□□ -2.21
SCAPERQ9BY12 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
SCAPERQ9BY12 RNU6-220P-201ENST00000390919 107 ntBASIC1.25□□□□□ -2.21
SCAPERQ9BY12 RNU6-712P-201ENST00000410558 100 ntBASIC1.25□□□□□ -2.21
SCAPERQ9BY12 OR9R1P-201ENST00000412200 877 ntBASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.25□□□□□ -2.21
SCAPERQ9BY12 RPL23AP3-201ENST00000453844 468 ntBASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AC117503.1-201ENST00000472241 394 ntBASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AC111193.1-201ENST00000504097 155 ntBASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.25□□□□□ -2.21
SCAPERQ9BY12 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.25□□□□□ -2.21
SCAPERQ9BY12 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
SCAPERQ9BY12 AC007785.2-201ENST00000598627 1916 ntBASIC1.24□□□□□ -2.21
SCAPERQ9BY12 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
SCAPERQ9BY12 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
SCAPERQ9BY12 AC016691.1-201ENST00000441321 413 ntBASIC1.24□□□□□ -2.21
SCAPERQ9BY12 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.24□□□□□ -2.21
SCAPERQ9BY12 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.24□□□□□ -2.21
SCAPERQ9BY12 AP003399.1-201ENST00000637534 361 ntBASIC1.24□□□□□ -2.21
SCAPERQ9BY12 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SCAPERQ9BY12 RNU6-31P-201ENST00000384388 108 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 DSTNP4-201ENST00000399472 474 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AL353689.1-201ENST00000438895 199 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 MTND4LP3-201ENST00000468320 276 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AC112518.2-201ENST00000508565 425 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 RNA5SP330-201ENST00000517096 96 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 OR5AL2P-201ENST00000532185 920 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 FAM60CP-201ENST00000591086 664 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AL355877.2-201ENST00000603670 358 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 MTND4P8-201ENST00000514997 1362 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 Y_RNA.258-201ENST00000364613 105 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 RNU6-1197P-201ENST00000391183 107 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AL136372.1-201ENST00000403060 228 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 RPL27AP8-201ENST00000424277 446 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AC092573.2-201ENST00000434546 243 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AC139453.3-201ENST00000493276 369 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 MIR4529-201ENST00000578110 78 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.23□□□□□ -2.21
SCAPERQ9BY12 AL031274.2-201ENST00000599419 203 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 MTND2P41-201ENST00000637599 773 ntBASIC1.23□□□□□ -2.21
SCAPERQ9BY12 ZNF702P-202ENST00000434269 1966 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 ZNF29P-201ENST00000225587 168 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 RNA5SP193-201ENST00000410353 107 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 RPL30P13-201ENST00000418873 348 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.22□□□□□ -2.21
SCAPERQ9BY12 YWHAZP8-201ENST00000436935 731 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 Z82190.1-201ENST00000454534 490 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 RNU4-18P-201ENST00000516751 149 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 SCARNA11.3-201ENST00000517276 130 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 AC133485.1-201ENST00000567176 124 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 AC138907.6-201ENST00000568401 126 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.22□□□□□ -2.21
SCAPERQ9BY12 AC025588.2-201ENST00000604851 466 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 AC013468.1-201ENST00000608680 598 ntBASIC1.22□□□□□ -2.21
SCAPERQ9BY12 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SCAPERQ9BY12 HAUS6P2-201ENST00000433254 2404 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AC010329.5-201ENST00000623497 2174 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 Y_RNA.115-201ENST00000363272 98 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 RNU6-173P-201ENST00000364215 104 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 RNU6-167P-201ENST00000384292 106 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 JTBP1-201ENST00000441314 247 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 DYNLL1P5-201ENST00000467158 270 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AC018437.1-201ENST00000492214 406 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AC118273.2-201ENST00000532092 465 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AC087465.1-201ENST00000560574 245 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 AP002826.1-201ENST00000608835 315 ntBASIC1.21□□□□□ -2.22
SCAPERQ9BY12 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
SCAPERQ9BY12 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.2□□□□□ -2.22
SCAPERQ9BY12 NACAP2-201ENST00000318548 624 ntBASIC1.2□□□□□ -2.22
SCAPERQ9BY12 RNU4-23P-201ENST00000362839 140 ntBASIC1.2□□□□□ -2.22
SCAPERQ9BY12 SNORD114-23-201ENST00000363536 72 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms