Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC092435.4-201ENST00000623012 4159 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.100-201ENST00000363141 102 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 RNU6-1297P-201ENST00000384415 104 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 RNU6-14P-201ENST00000384630 106 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 HSPE1P8-201ENST00000406997 288 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 RNU6-193P-201ENST00000410977 107 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 RPS12P24-201ENST00000412619 387 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AL591704.1-201ENST00000432574 275 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AL591212.2-201ENST00000433923 257 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AL590639.1-201ENST00000456484 337 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 SNORD105B-201ENST00000458770 79 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC098591.2-201ENST00000510152 315 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 RNU2-27P-201ENST00000516185 142 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.689-201ENST00000516589 107 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 SNORA25.17-201ENST00000517184 124 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 SUMO2P20-201ENST00000520803 283 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC008521.1-201ENST00000587471 187 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC016925.2-201ENST00000605108 242 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AL158032.1-201ENST00000605401 106 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC080078.3-201ENST00000605407 463 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AL080274.1-201ENST00000605565 220 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AL022345.1-201ENST00000607292 135 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 AC084781.2-201ENST00000615568 161 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN3Q9BTN0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 ZNF962P-201ENST00000443465 3140 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 RNU6-552P-201ENST00000362869 119 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.133-201ENST00000363428 110 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 SNORD66.1-201ENST00000391230 76 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 RNU6-903P-201ENST00000391270 109 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 RNU4-26P-201ENST00000410270 107 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 ARL5AP1-201ENST00000418991 388 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 RPL7P46-201ENST00000425129 740 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AC017083.1-201ENST00000428093 483 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AC108751.2-201ENST00000469993 231 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 RPS23P3-201ENST00000470993 430 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 RPS15AP34-201ENST00000487776 387 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 VWA8P1-201ENST00000510889 176 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.665-201ENST00000516177 98 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AC135001.1-201ENST00000544546 283 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AL627309.6-201ENST00000606857 840 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AC090132.2-201ENST00000615881 347 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 MIR7112-201ENST00000616126 65 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AL132822.1-201ENST00000617063 513 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 7SK.10-201ENST00000621414 298 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AL078596.1-201ENST00000624856 447 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 AC119674.1-207ENST00000641355 633 ntBASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN3Q9BTN0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 RNU6-288P-201ENST00000363690 104 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 SNORA5B-201ENST00000363786 132 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms