Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC113155.1-201ENST00000511141 769 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 PSMA2P1-201ENST00000526365 646 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC007458.1-201ENST00000542812 373 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 LINC00933-203ENST00000559812 219 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC009063.1-201ENST00000563342 702 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 MIR4775-201ENST00000581168 75 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AL022154.1-201ENST00000604698 785 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC092447.7-201ENST00000422212 1621 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.46□□□□□ -1.85
HERPUD2Q9BSE4 ASNSP3-201ENST00000451989 1306 ntBASIC3.46□□□□□ -1.85
HERPUD2Q9BSE4 MIR34B-201ENST00000385076 84 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AL139039.1-201ENST00000401900 692 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 RNA5SP229-201ENST00000410809 99 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 OR6C66P-201ENST00000414917 930 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 OR51A5P-201ENST00000415429 942 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 MTCYBP5-201ENST00000423752 1135 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 SAR1AP4-201ENST00000429225 591 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AL159987.2-201ENST00000432754 307 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AL451074.3-201ENST00000437709 472 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 NIPA2P5-201ENST00000452282 464 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC006539.3-201ENST00000454258 129 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC233279.1-201ENST00000455300 423 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 RPL27AP5-201ENST00000469428 449 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 HMGB1P29-201ENST00000505659 499 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 MRPS36P2-201ENST00000512569 299 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-685P-201ENST00000517088 95 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC010546.1-201ENST00000569391 485 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC007151.1-201ENST00000572774 483 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 MIR5692A1-201ENST00000580523 69 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC103987.3-201ENST00000582071 292 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC025449.1-201ENST00000603896 529 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 uc_338.11-201ENST00000619132 160 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC011155.2-201ENST00000623202 216 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AL359740.1-201ENST00000624340 592 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 AC010889.1-201ENST00000566193 2666 ntBASIC3.46□□□□□ -1.86
HERPUD2Q9BSE4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 SNORD56.3-201ENST00000363507 71 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-259P-201ENST00000383999 107 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-606P-201ENST00000384721 111 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 SNORA40C-201ENST00000391285 128 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AL078595.1-201ENST00000404458 226 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 RNU2-66P-201ENST00000410650 161 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AC104058.1-201ENST00000448028 297 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 MTND1P18-201ENST00000448191 573 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 RPS29P15-201ENST00000458329 171 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 RPL21P13-201ENST00000488305 481 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 SEM1P1-201ENST00000506694 209 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AC108078.1-201ENST00000508073 725 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 FAM92A1P1-201ENST00000528023 890 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AC135279.1-201ENST00000543493 504 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AL121821.2-201ENST00000556081 394 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AC010620.2-201ENST00000600135 313 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 SRGNP1-201ENST00000603392 451 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AC004832.5-201ENST00000608677 401 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 MIR7975-201ENST00000619350 68 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
HERPUD2Q9BSE4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 Y_RNA.1-201ENST00000352915 104 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 MIR412-201ENST00000362142 91 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-623P-201ENST00000363143 105 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-1029P-201ENST00000384109 107 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-1103P-201ENST00000384150 107 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 MIR490-201ENST00000384865 128 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AL122016.1-201ENST00000403365 367 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 RN7SKP111-201ENST00000410349 271 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 BX323014.1-201ENST00000412876 237 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms