Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 MIR5701-3-201ENST00000578890 82 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 MIR4737-201ENST00000583979 81 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 MIR5701-1-201ENST00000585138 82 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC123912.5-201ENST00000605470 343 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC004852.3-201ENST00000614131 326 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 MIR5701-2-201ENST00000615634 82 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 AC087190.4-201ENST00000574616 8334 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 Y_RNA.245-201ENST00000364493 95 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 RNU6-1317P-201ENST00000364582 104 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 RNU6-741P-201ENST00000383889 107 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 MIR141-201ENST00000384975 95 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 MIR548M-201ENST00000408260 86 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 RNU6-1025P-201ENST00000410629 104 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 RNA5SP146-201ENST00000410743 123 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 AL590135.1-201ENST00000422215 156 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 LINC01399-202ENST00000458450 244 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 HMGB3P17-201ENST00000504195 649 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 OR51K1P-201ENST00000510214 950 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 AL355877.2-201ENST00000603670 358 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 MTND5P9-201ENST00000503854 1755 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
TRIM56Q9BRZ2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 RNU6-595P-201ENST00000363944 107 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 Y_RNA.416-201ENST00000384014 113 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 Y_RNA.785-201ENST00000384290 109 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 MIR521-1-201ENST00000384902 87 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 MIR192-201ENST00000384915 110 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 HDGFP1-201ENST00000405943 252 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 RNU2-33P-201ENST00000410344 192 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AC016397.1-201ENST00000412463 242 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AC091390.3-201ENST00000426478 338 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 IGLV2-34-201ENST00000490007 283 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 GZMAP1-201ENST00000503054 631 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 RNA5SP446-201ENST00000515955 82 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 SNORA31.8-201ENST00000516327 108 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AL137100.2-201ENST00000555786 315 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AMZ2P1-203ENST00000565833 850 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 AC234771.5-201ENST00000600161 514 ntBASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM56Q9BRZ2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 MFSD8-216ENST00000641147 4009 ntBASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 Y_RNA.20-201ENST00000362479 113 ntBASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 RNA5SP372-201ENST00000390836 115 ntBASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 Y_RNA.592-201ENST00000410274 109 ntBASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 RNU2-71P-201ENST00000411395 189 ntBASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 RAC1P3-201ENST00000416129 580 ntBASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 MYL8P-204ENST00000431574 518 ntBASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM56Q9BRZ2 AL159987.2-201ENST00000432754 307 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms