Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VRK1Q99986 ZNF807-201ENST00000328088 1707 ntBASIC3.67□□□□□ -1.82
VRK1Q99986 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
VRK1Q99986 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VRK1Q99986 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.66□□□□□ -1.82
VRK1Q99986 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VRK1Q99986 FRG1CP-201ENST00000358464 769 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 RNU6-214P-201ENST00000384130 107 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 RNU1-89P-201ENST00000384592 164 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 RNU6-1011P-201ENST00000384668 107 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 RPL21P17-201ENST00000397467 475 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VRK1Q99986 MIR548F5-201ENST00000408421 86 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.66□□□□□ -1.82
VRK1Q99986 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.66□□□□□ -1.82
VRK1Q99986 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.66□□□□□ -1.82
VRK1Q99986 COX6B1P7-201ENST00000430845 235 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 RPS3AP52-201ENST00000435639 297 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.66□□□□□ -1.82
VRK1Q99986 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
VRK1Q99986 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.66□□□□□ -1.82
VRK1Q99986 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.66□□□□□ -1.82
VRK1Q99986 HPRT1P3-201ENST00000539521 576 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.66□□□□□ -1.82
VRK1Q99986 IMMP1LP2-201ENST00000552954 492 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 AC025884.1-201ENST00000556034 378 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.66□□□□□ -1.82
VRK1Q99986 VN1R85P-201ENST00000601587 426 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.66□□□□□ -1.82
VRK1Q99986 AL645944.1-201ENST00000603857 493 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 AC016727.1-205ENST00000605437 569 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 AL591034.3-201ENST00000605511 685 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 AC112484.5-201ENST00000624189 228 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.66□□□□□ -1.82
VRK1Q99986 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.66□□□□□ -1.82
VRK1Q99986 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.66□□□□□ -1.82
VRK1Q99986 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VRK1Q99986 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VRK1Q99986 RPS4XP5-202ENST00000449995 1334 ntBASIC3.66□□□□□ -1.82
VRK1Q99986 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VRK1Q99986 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VRK1Q99986 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
VRK1Q99986 FAM35BP-202ENST00000497389 3337 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.65□□□□□ -1.83
VRK1Q99986 SPRR2C-201ENST00000290702 219 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 RNU1-14P-201ENST00000362759 152 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 RNA5SP322-201ENST00000363617 119 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
VRK1Q99986 SNORA57.1-201ENST00000391227 145 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 FAT1P1-201ENST00000406588 507 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 RPL37P10-201ENST00000412884 288 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AL592148.1-201ENST00000413568 445 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AC108032.1-201ENST00000416706 207 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 ATG3P1-201ENST00000419507 911 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.65□□□□□ -1.83
VRK1Q99986 AL627311.1-201ENST00000431514 115 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.65□□□□□ -1.83
VRK1Q99986 FABP5P14-201ENST00000437273 393 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.65□□□□□ -1.83
VRK1Q99986 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 CEACAMP4-201ENST00000457676 421 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.65□□□□□ -1.83
VRK1Q99986 MTND4P17-201ENST00000470444 350 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AC084357.1-201ENST00000473404 255 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AC006517.1-201ENST00000480485 328 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AC139453.3-201ENST00000493276 369 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AC026801.1-201ENST00000497178 464 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 RPS27P27-201ENST00000498779 255 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 RN7SKP24-201ENST00000515888 284 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 RNU6-1332P-201ENST00000516666 104 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.65□□□□□ -1.83
VRK1Q99986 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.65□□□□□ -1.83
VRK1Q99986 HMGB1P14-201ENST00000557424 591 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 MIR3160-1-201ENST00000577972 85 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.65□□□□□ -1.83
VRK1Q99986 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.65□□□□□ -1.83
VRK1Q99986 APOOP1-201ENST00000604695 592 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 RNU4-89P-201ENST00000607443 133 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AL391261.4-201ENST00000616012 481 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 MIR8059-201ENST00000620427 81 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 AL160413.1-201ENST00000622780 310 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.83
VRK1Q99986 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
VRK1Q99986 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VRK1Q99986 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.65□□□□□ -1.83
VRK1Q99986 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
VRK1Q99986 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
VRK1Q99986 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VRK1Q99986 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VRK1Q99986 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VRK1Q99986 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VRK1Q99986 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.64□□□□□ -1.83
VRK1Q99986 FTLP6-201ENST00000355274 422 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 SNORD3E-201ENST00000362899 217 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 RNU6-384P-201ENST00000364900 104 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.64□□□□□ -1.83
VRK1Q99986 AL591034.1-201ENST00000407447 340 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 MIR1911-201ENST00000410783 80 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms