Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN18Q99952 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN18Q99952 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN18Q99952 MTND5P30-201ENST00000452896 1731 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN18Q99952 AL049641.1-201ENST00000441055 1948 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PTPN18Q99952 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN18Q99952 RNU6-335P-201ENST00000364563 113 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN18Q99952 RNU6-1181P-201ENST00000384191 106 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 RNU6-601P-201ENST00000384540 107 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 Y_RNA.646-201ENST00000410980 101 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 RPL7P46-201ENST00000425129 740 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN18Q99952 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN18Q99952 AC005019.1-201ENST00000436455 431 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 AC004866.2-201ENST00000438285 481 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 AC104058.1-201ENST00000448028 297 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN18Q99952 RPL21P93-201ENST00000480465 489 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 AC015911.1-201ENST00000495111 156 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN18Q99952 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN18Q99952 AP002404.1-201ENST00000532005 451 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 AC135001.1-201ENST00000544546 283 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 AC010653.1-201ENST00000571108 881 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 MIR5583-1-201ENST00000580941 59 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 NUTF2P8-201ENST00000604593 363 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN18Q99952 AC005014.2-201ENST00000607795 599 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 MIR7112-201ENST00000616126 65 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN18Q99952 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN18Q99952 ZNF519P1-201ENST00000449011 1626 ntBASIC4.27□□□□□ -1.73
PTPN18Q99952 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN18Q99952 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN18Q99952 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN18Q99952 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN18Q99952 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN18Q99952 API5P2-201ENST00000397055 1498 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 TPTE2P4-201ENST00000258589 1605 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 SNORD3E-201ENST00000362899 217 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 SNORA38.1-201ENST00000364172 131 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 Y_RNA.463-201ENST00000384271 102 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 SNORA24.1-201ENST00000384401 135 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 Y_RNA.500-201ENST00000384466 111 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 Y_RNA.556-201ENST00000384677 113 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 Y_RNA.576-201ENST00000384781 102 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PTPN18Q99952 AL109755.1-201ENST00000401791 649 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 MIR1289-1-201ENST00000408836 144 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 RNA5SP107-201ENST00000411358 122 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 DBIP2-201ENST00000419076 262 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 AL160004.2-201ENST00000432935 350 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 SNORD97-201ENST00000459187 142 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN18Q99952 RPL5P30-201ENST00000465511 891 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 MTATP8P1-201ENST00000467115 207 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 RN7SL585P-201ENST00000470538 280 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 AC010285.1-201ENST00000470580 392 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 S100A11P1-201ENST00000477525 312 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 AC010655.3-201ENST00000478818 450 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 AC025518.1-201ENST00000479856 347 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 HMGB1P30-201ENST00000492455 606 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 VN1R104P-201ENST00000505115 1009 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN18Q99952 RNU6-189P-201ENST00000516120 101 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 RNA5SP208-201ENST00000516156 78 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 RNU6-390P-201ENST00000516259 103 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 SNORA31.20-201ENST00000517111 133 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 RNU6-840P-201ENST00000517275 65 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN18Q99952 MYL12BP1-201ENST00000569826 507 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.26□□□□□ -1.73
PTPN18Q99952 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN18Q99952 AC092747.3-201ENST00000603769 301 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 AC012443.1-201ENST00000605605 231 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 AL162373.1-201ENST00000620433 407 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 AL669831.3-213ENST00000636676 183 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN18Q99952 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN18Q99952 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PTPN18Q99952 SCN1A-220ENST00000641603 12506 ntBASIC4.26□□□□□ -1.73
PTPN18Q99952 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN18Q99952 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN18Q99952 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN18Q99952 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN18Q99952 PNPT1P2-201ENST00000456768 2050 ntBASIC4.25□□□□□ -1.73
PTPN18Q99952 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN18Q99952 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms