Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.85□□□□□ -1.95
CPNE1Q99829 AC073648.5-201ENST00000603502 305 ntBASIC2.85□□□□□ -1.95
CPNE1Q99829 MTND4LP5-201ENST00000605152 292 ntBASIC2.85□□□□□ -1.95
CPNE1Q99829 AL121992.2-201ENST00000606262 256 ntBASIC2.85□□□□□ -1.95
CPNE1Q99829 AL139286.2-201ENST00000606838 396 ntBASIC2.85□□□□□ -1.95
CPNE1Q99829 AC092656.1-203ENST00000624134 423 ntBASIC2.85□□□□□ -1.95
CPNE1Q99829 Z99571.1-201ENST00000636677 394 ntBASIC2.85□□□□□ -1.95
CPNE1Q99829 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CPNE1Q99829 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CPNE1Q99829 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CPNE1Q99829 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.84□□□□□ -1.95
CPNE1Q99829 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CPNE1Q99829 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.84□□□□□ -1.95
CPNE1Q99829 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CPNE1Q99829 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.84□□□□□ -1.95
CPNE1Q99829 RNU6-778P-201ENST00000363269 103 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 RNU1-73P-201ENST00000383971 164 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 SNORA24.1-201ENST00000384401 135 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.84□□□□□ -1.95
CPNE1Q99829 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CPNE1Q99829 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AC092809.3-201ENST00000415453 231 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AL513043.1-201ENST00000439124 535 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 VN1R34P-201ENST00000447387 883 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.84□□□□□ -1.95
CPNE1Q99829 GSTA11P-201ENST00000452866 669 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 MTCYBP1-201ENST00000454315 1119 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.84□□□□□ -1.95
CPNE1Q99829 RPS29P12-201ENST00000460178 152 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AL358832.1-201ENST00000497800 389 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC116562.3-201ENST00000506136 177 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AC074250.1-201ENST00000511117 192 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AP003122.3-201ENST00000526316 255 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC068587.5-201ENST00000528506 175 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC084851.1-201ENST00000529105 249 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 ADI1P3-201ENST00000549509 470 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.84□□□□□ -1.95
CPNE1Q99829 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CPNE1Q99829 AC024619.4-201ENST00000580924 316 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC023043.3-201ENST00000593113 385 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC012468.1-201ENST00000604888 430 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 YPEL5P2-201ENST00000605553 359 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC012409.4-201ENST00000612923 249 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 AC093783.1-201ENST00000612976 329 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CPNE1Q99829 AC110079.1-202ENST00000635213 138 ntBASIC2.84□□□□□ -1.95
CPNE1Q99829 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.84□□□□□ -1.95
CPNE1Q99829 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.84□□□□□ -1.96
CPNE1Q99829 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CPNE1Q99829 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.83□□□□□ -1.96
CPNE1Q99829 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CPNE1Q99829 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CPNE1Q99829 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
CPNE1Q99829 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.83□□□□□ -1.96
CPNE1Q99829 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
CPNE1Q99829 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CPNE1Q99829 RNU6-181P-201ENST00000363225 107 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 RNU6-179P-201ENST00000363350 107 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 SNORA38.1-201ENST00000364172 131 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 MIR767-201ENST00000390228 109 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 RNA5SP354-201ENST00000391247 136 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AL663109.1-201ENST00000411498 844 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.83□□□□□ -1.96
CPNE1Q99829 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.83□□□□□ -1.96
CPNE1Q99829 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.83□□□□□ -1.96
CPNE1Q99829 SKA2P1-201ENST00000425592 390 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 MTATP6P16-201ENST00000434543 526 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 NIPA2P5-201ENST00000452282 464 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.83□□□□□ -1.96
CPNE1Q99829 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 C1DP4-201ENST00000455429 424 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC022364.2-201ENST00000457963 554 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC003982.1-202ENST00000469928 248 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC126182.1-201ENST00000478134 357 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 RN7SL297P-201ENST00000483161 293 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 RPS29P20-201ENST00000489592 171 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC026801.1-201ENST00000497178 464 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 SUMO2P6-201ENST00000505273 288 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC109927.2-201ENST00000506416 303 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.83□□□□□ -1.96
CPNE1Q99829 RAC1P5-201ENST00000512182 576 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.83□□□□□ -1.96
CPNE1Q99829 RNU1-103P-201ENST00000516502 125 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 RNU6-445P-201ENST00000516949 107 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC022634.1-201ENST00000520765 532 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 SUB1P1-201ENST00000524415 382 ntBASIC2.83□□□□□ -1.96
CPNE1Q99829 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.83□□□□□ -1.96
CPNE1Q99829 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.83□□□□□ -1.96
CPNE1Q99829 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.83□□□□□ -1.96
CPNE1Q99829 AP001646.1-201ENST00000527936 915 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms