Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.24□□□□□ -1.89
PKP4Q99569 AL136221.1-201ENST00000621449 509 ntBASIC3.24□□□□□ -1.89
PKP4Q99569 AC027309.3-201ENST00000623419 351 ntBASIC3.24□□□□□ -1.89
PKP4Q99569 U6.105-201ENST00000637379 88 ntBASIC3.24□□□□□ -1.89
PKP4Q99569 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PKP4Q99569 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKP4Q99569 AC091564.4-201ENST00000533934 2194 ntBASIC3.24□□□□□ -1.89
PKP4Q99569 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKP4Q99569 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKP4Q99569 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKP4Q99569 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PKP4Q99569 RNU5E-8P-201ENST00000363502 116 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 U3.11-201ENST00000364476 212 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 RNU4-76P-201ENST00000364509 141 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 RNU6-606P-201ENST00000384721 111 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PKP4Q99569 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKP4Q99569 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
PKP4Q99569 RNU6-1068P-201ENST00000410958 103 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.23□□□□□ -1.89
PKP4Q99569 NDUFB4P7-201ENST00000423198 363 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 AC097713.2-201ENST00000430199 356 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 BX679664.1-201ENST00000434429 253 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 RPS20P5-201ENST00000434808 360 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.23□□□□□ -1.89
PKP4Q99569 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
PKP4Q99569 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.23□□□□□ -1.89
PKP4Q99569 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.23□□□□□ -1.89
PKP4Q99569 RNU7-59P-201ENST00000459101 61 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 HSPE1P6-201ENST00000479457 291 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 RPS4XP22-201ENST00000480755 780 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 RPL21P13-201ENST00000488305 481 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 AC092185.1-201ENST00000491371 97 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 HSPD1P15-201ENST00000505573 1122 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 SNORD60.2-201ENST00000516883 86 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 DNAJC8P1-201ENST00000554535 372 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 NCAPGP2-201ENST00000557911 754 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.23□□□□□ -1.89
PKP4Q99569 MIR3609-201ENST00000582661 80 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 MIR4276-201ENST00000584832 70 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.23□□□□□ -1.89
PKP4Q99569 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.23□□□□□ -1.89
PKP4Q99569 AL354950.2-201ENST00000617939 290 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.23□□□□□ -1.89
PKP4Q99569 AC093010.3-201ENST00000570269 15214 ntBASIC3.23□□□□□ -1.89
PKP4Q99569 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKP4Q99569 AC006020.1-201ENST00000420179 1854 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PKP4Q99569 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 RNU1-70P-201ENST00000362618 164 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 RNU5A-1-201ENST00000362698 116 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 RNU6-1078P-201ENST00000364522 103 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 Y_RNA.255-201ENST00000364581 97 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 RNU6-767P-201ENST00000384132 107 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 AL591416.1-201ENST00000404015 867 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC016831.2-201ENST00000417179 352 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 RPS15AP6-201ENST00000420703 385 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 PPP1R11P2-201ENST00000423543 382 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP4Q99569 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.22□□□□□ -1.89
PKP4Q99569 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.22□□□□□ -1.89
PKP4Q99569 AL590383.1-201ENST00000428602 75 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC006946.1-201ENST00000429106 328 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 YME1L1P1-201ENST00000429435 297 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AL353705.1-201ENST00000433468 480 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC005019.1-201ENST00000436455 431 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 PRDX3P3-201ENST00000447765 522 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.22□□□□□ -1.89
PKP4Q99569 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP4Q99569 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP4Q99569 AC104472.2-201ENST00000469035 601 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 RPL31P60-201ENST00000478450 367 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC233702.1-201ENST00000482905 502 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 AC006445.2-201ENST00000510061 472 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP4Q99569 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.22□□□□□ -1.89
PKP4Q99569 GMPSP1-201ENST00000514075 579 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.22□□□□□ -1.89
PKP4Q99569 SNORD27.1-201ENST00000516319 72 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 RNU6-798P-201ENST00000516912 103 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 SNORA31.22-201ENST00000517204 135 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 AP000857.1-201ENST00000532151 543 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 OR5BN1P-201ENST00000532955 829 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.22□□□□□ -1.89
PKP4Q99569 ARL2BPP2-201ENST00000550907 489 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC011611.1-201ENST00000552179 197 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP4Q99569 AC103710.2-201ENST00000609912 942 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AL121757.2-201ENST00000611223 313 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 uc_338.1-201ENST00000612113 180 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 AC010133.1-201ENST00000615809 842 ntBASIC3.22□□□□□ -1.89
PKP4Q99569 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms