Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RNU6-1077P-201ENST00000410506 102 ntBASIC0.44□□□□□ -2.34
SPENQ96T58 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.44□□□□□ -2.34
SPENQ96T58 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.44□□□□□ -2.34
SPENQ96T58 SNORA31.18-201ENST00000517043 134 ntBASIC0.44□□□□□ -2.34
SPENQ96T58 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.44□□□□□ -2.34
SPENQ96T58 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.44□□□□□ -2.34
SPENQ96T58 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.44□□□□□ -2.34
SPENQ96T58 RNU6-48P-201ENST00000384161 107 ntBASIC0.44□□□□□ -2.34
SPENQ96T58 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.44□□□□□ -2.34
SPENQ96T58 SNRPGP12-201ENST00000449481 213 ntBASIC0.44□□□□□ -2.34
SPENQ96T58 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.44□□□□□ -2.34
SPENQ96T58 RPL30P14-201ENST00000482744 348 ntBASIC0.44□□□□□ -2.34
SPENQ96T58 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.44□□□□□ -2.34
SPENQ96T58 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.44□□□□□ -2.34
SPENQ96T58 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.44□□□□□ -2.34
SPENQ96T58 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.44□□□□□ -2.34
SPENQ96T58 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
SPENQ96T58 OR5H6-203ENST00000642105 978 ntBASIC0.44□□□□□ -2.34
SPENQ96T58 AL442644.1-201ENST00000454390 3105 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 ZNF29P-201ENST00000225587 168 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 SNORA3A-201ENST00000364113 130 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 AL513475.1-201ENST00000406602 315 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.43□□□□□ -2.34
SPENQ96T58 MTCO1P3-201ENST00000429327 192 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 RPL39P29-201ENST00000447779 157 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.43□□□□□ -2.34
SPENQ96T58 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SPENQ96T58 U8.14-201ENST00000390843 143 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 MRPL35P3-201ENST00000421557 364 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.43□□□□□ -2.34
SPENQ96T58 AC055731.1-201ENST00000474387 401 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 RPL31P60-201ENST00000478450 367 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.43□□□□□ -2.34
SPENQ96T58 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.43□□□□□ -2.34
SPENQ96T58 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SPENQ96T58 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.43□□□□□ -2.34
SPENQ96T58 SNORA1.3-201ENST00000384676 136 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 MIR153-1-201ENST00000384914 90 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 MIR146A-201ENST00000385201 99 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 AL356131.1-201ENST00000405826 414 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 AC008751.2-201ENST00000597885 980 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 AL109918.3-201ENST00000603072 338 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 AC009974.1-201ENST00000608881 455 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.43□□□□□ -2.34
SPENQ96T58 MIR6076-201ENST00000617521 113 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 AC083865.1-201ENST00000636634 831 ntBASIC0.43□□□□□ -2.34
SPENQ96T58 SNORA8.3-201ENST00000384679 139 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.42□□□□□ -2.34
SPENQ96T58 SNORA44.1-201ENST00000517031 108 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
SPENQ96T58 AL160236.1-201ENST00000556317 195 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 MIR3198-2-201ENST00000577868 80 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 DBF4P1-201ENST00000412976 1892 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 MIR92A2-201ENST00000385299 75 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.42□□□□□ -2.34
SPENQ96T58 AC244098.2-201ENST00000422068 99 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.42□□□□□ -2.34
SPENQ96T58 MTND6P13-201ENST00000443510 523 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 AC245128.3-201ENST00000594721 748 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 AC110491.1-201ENST00000562191 2010 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SPENQ96T58 RNU6-185P-201ENST00000384421 107 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 MRPL35P1-201ENST00000404272 572 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 RPL30P13-201ENST00000418873 348 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 AL606489.2-201ENST00000433886 234 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SPENQ96T58 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.42□□□□□ -2.34
SPENQ96T58 AC084373.1-201ENST00000603311 235 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 AL592148.2-201ENST00000612210 372 ntBASIC0.42□□□□□ -2.34
SPENQ96T58 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.41□□□□□ -2.34
SPENQ96T58 SNORA14A-201ENST00000364773 135 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 RNU6-700P-201ENST00000391043 107 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 MTCO1P56-201ENST00000401674 224 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 UBE2V2P3-201ENST00000433562 437 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 AL353898.1-201ENST00000444055 238 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.41□□□□□ -2.34
SPENQ96T58 Y_RNA.757-201ENST00000578934 114 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 AL355472.4-201ENST00000610233 626 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SPENQ96T58 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.41□□□□□ -2.34
SPENQ96T58 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SPENQ96T58 Y_RNA.35-201ENST00000362601 101 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 MIR607-201ENST00000385241 96 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 RPS25P9-201ENST00000435591 252 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 AL358794.1-201ENST00000445689 381 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SPENQ96T58 AC025857.1-201ENST00000525252 377 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 AC136932.1-201ENST00000574771 208 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 MIR5571-201ENST00000577998 113 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.41□□□□□ -2.34
SPENQ96T58 RNU6-335P-201ENST00000364563 113 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.41□□□□□ -2.34
SPENQ96T58 RSL24D1P8-201ENST00000434442 492 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 RPL21P103-201ENST00000479921 488 ntBASIC0.41□□□□□ -2.34
SPENQ96T58 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.41□□□□□ -2.34
SPENQ96T58 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SPENQ96T58 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.41□□□□□ -2.34
SPENQ96T58 RABEPKP1-201ENST00000440529 1026 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 AP005639.2-201ENST00000527592 928 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms