Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.39□□□□□ -2.19
IFT140Q96RY7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.39□□□□□ -2.19
IFT140Q96RY7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.39□□□□□ -2.19
IFT140Q96RY7 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
IFT140Q96RY7 AC025594.3-201ENST00000613068 790 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 AC025263.3-201ENST00000622965 1396 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
IFT140Q96RY7 RNU6-670P-201ENST00000364312 104 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 AL512604.1-201ENST00000404812 257 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 RPL27AP8-201ENST00000424277 446 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 Z80107.1-201ENST00000436830 412 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.38□□□□□ -2.19
IFT140Q96RY7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 C1DP3-201ENST00000455013 423 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 AC055731.1-201ENST00000474387 401 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 OR52A4P-202ENST00000481634 799 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.38□□□□□ -2.19
IFT140Q96RY7 AC133485.1-201ENST00000567176 124 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 AC138907.6-201ENST00000568401 126 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 AC103710.4-201ENST00000609301 899 ntBASIC1.38□□□□□ -2.19
IFT140Q96RY7 SEPT2P1-201ENST00000419651 180 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 SDAD1P3-201ENST00000427380 333 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AL392003.1-201ENST00000434394 243 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.37□□□□□ -2.19
IFT140Q96RY7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.37□□□□□ -2.19
IFT140Q96RY7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC107032.1-201ENST00000485945 480 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC093770.1-201ENST00000511559 571 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC084033.1-201ENST00000550830 633 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.37□□□□□ -2.19
IFT140Q96RY7 GAS5-AS1-201ENST00000602767 694 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC025165.5-201ENST00000602802 578 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AL450336.1-201ENST00000605180 586 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 MTND2P41-201ENST00000637599 773 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 OR4G2P-201ENST00000328113 903 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.37□□□□□ -2.19
IFT140Q96RY7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC092573.2-201ENST00000434546 243 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 TPT1P8-201ENST00000510120 555 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 RNA5SP395-201ENST00000516567 118 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC135803.1-201ENST00000608748 565 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AC090970.3-201ENST00000612566 866 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 AP006248.3-201ENST00000623580 594 ntBASIC1.37□□□□□ -2.19
IFT140Q96RY7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.37□□□□□ -2.19
IFT140Q96RY7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 MIR147B-201ENST00000390185 80 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 RPS3AP24-201ENST00000407896 734 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 VN1R36P-201ENST00000414936 291 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.36□□□□□ -2.19
IFT140Q96RY7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.36□□□□□ -2.19
IFT140Q96RY7 USP12PX-201ENST00000432383 1057 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 ZNF965P-201ENST00000432501 817 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 MTCYBP3-201ENST00000445588 1137 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 MTATP6P7-201ENST00000453315 681 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 SNORA70.16-201ENST00000516390 95 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.36□□□□□ -2.19
IFT140Q96RY7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.36□□□□□ -2.19
IFT140Q96RY7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.36□□□□□ -2.19
IFT140Q96RY7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.36□□□□□ -2.19
IFT140Q96RY7 AC104229.1-201ENST00000561364 255 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 AC011260.1-201ENST00000578420 472 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 AC025588.3-201ENST00000604182 274 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 AC008163.1-202ENST00000636004 2889 ntBASIC1.36□□□□□ -2.19
IFT140Q96RY7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
IFT140Q96RY7 RNU6-1226P-201ENST00000384317 107 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 RNU6-19P-201ENST00000384718 107 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 RN7SKP200-201ENST00000410564 320 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.35□□□□□ -2.19
IFT140Q96RY7 AC099677.1-201ENST00000420575 175 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.35□□□□□ -2.19
IFT140Q96RY7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.35□□□□□ -2.19
IFT140Q96RY7 MTND4LP3-201ENST00000468320 276 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 AP005902.1-201ENST00000521358 186 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 AC040174.2-201ENST00000602701 465 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.35□□□□□ -2.19
IFT140Q96RY7 AC008555.8-201ENST00000623602 2168 ntBASIC1.35□□□□□ -2.19
IFT140Q96RY7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 TPTE2P4-201ENST00000258589 1605 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
IFT140Q96RY7 RNU6-173P-201ENST00000364215 104 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 Y_RNA.458-201ENST00000384240 102 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 RNU6-1235P-201ENST00000384559 107 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 RNU6-821P-201ENST00000390995 107 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.34□□□□□ -2.19
IFT140Q96RY7 AC097499.1-201ENST00000444277 208 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 RNU6-498P-201ENST00000459468 107 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 AC104057.1-201ENST00000515547 497 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.34□□□□□ -2.19
IFT140Q96RY7 AL355877.2-201ENST00000603670 358 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 AC103810.9-201ENST00000606688 112 ntBASIC1.34□□□□□ -2.19
IFT140Q96RY7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.34□□□□□ -2.19
IFT140Q96RY7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.34□□□□□ -2.19
IFT140Q96RY7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
IFT140Q96RY7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
IFT140Q96RY7 NACAP2-201ENST00000318548 624 ntBASIC1.33□□□□□ -2.2
IFT140Q96RY7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
IFT140Q96RY7 EIF4EP4-201ENST00000424916 578 ntBASIC1.33□□□□□ -2.2
IFT140Q96RY7 AL358176.2-201ENST00000425769 204 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms