Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL358176.3-201ENST00000420757 454 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 AL450023.3-201ENST00000440592 271 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 AC000111.2-201ENST00000448200 210 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 AC104073.1-201ENST00000451988 151 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 HMGB3P16-201ENST00000508037 287 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 AC005868.1-201ENST00000536421 331 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 MIR4472-2-201ENST00000582069 67 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 MIR3138-201ENST00000585238 82 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 BDH2P1-201ENST00000602288 736 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 AC006329.2-201ENST00000611491 394 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 AL022401.1-201ENST00000619498 108 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 SNORD39.4-201ENST00000620099 78 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 Y_RNA.23-201ENST00000362496 106 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 SNORA22-201ENST00000383907 134 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 RNU6-476P-201ENST00000384726 107 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 MIR521-1-201ENST00000384902 87 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 OR2AH1P-201ENST00000425717 928 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 AC024067.1-201ENST00000426199 223 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 U8.22-201ENST00000459141 133 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 MIR2355-201ENST00000517199 87 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 AL590705.4-201ENST00000532209 134 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 AC067852.4-201ENST00000590314 478 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 SNHG22-203ENST00000617833 660 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 AC007998.5-201ENST00000622938 237 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 AC034229.5-201ENST00000624258 185 ntBASIC5.52□□□□□ -1.53
TRIM47Q96LD4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TRIM47Q96LD4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AL359837.1-201ENST00000381357 287 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AL160275.3-201ENST00000423876 471 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AC011742.1-201ENST00000431448 434 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AP000936.3-201ENST00000438127 255 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 UQCRBP2-201ENST00000447827 297 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AL359073.1-201ENST00000448036 403 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 RPS17P2-201ENST00000461663 408 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AC005726.1-201ENST00000494679 427 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AC023424.1-201ENST00000496058 459 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 RNU6-659P-201ENST00000516454 104 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 SNORA27.4-201ENST00000516650 95 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 MIR2116-201ENST00000517221 80 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 DEFB108D-201ENST00000527787 222 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AP001781.1-201ENST00000530977 207 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 CYCSP29-201ENST00000533731 318 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 TRAV28-201ENST00000557548 323 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 MIR5692C2-201ENST00000577959 77 ntBASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM47Q96LD4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 Y_RNA.412-201ENST00000384001 104 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 SNORA70C-201ENST00000384538 135 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 AL358453.1-201ENST00000422522 250 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 AL645608.4-201ENST00000423619 154 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 AC005002.2-201ENST00000438228 269 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 CYCSP43-201ENST00000438233 310 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 AC091868.1-201ENST00000508746 304 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 AC108471.1-201ENST00000513977 287 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 RNA5SP249-201ENST00000516127 99 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 RN7SL802P-201ENST00000577858 299 ntBASIC5.5□□□□□ -1.53
TRIM47Q96LD4 AL031601.2-202ENST00000622650 282 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms