Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC009159.1-201ENST00000618386 642 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 MIR5739-201ENST00000619803 80 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 AC009269.6-201ENST00000621778 588 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 MIR3199-2-201ENST00000636243 86 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 AC099063.3-201ENST00000642066 185 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 RNU6-223P-201ENST00000362830 107 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 U8.3-201ENST00000363321 132 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 RNU6-777P-201ENST00000364265 104 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 RNU4-68P-201ENST00000364314 141 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 MIR491-201ENST00000384877 84 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 BTF3P7-201ENST00000407097 488 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AC005005.2-201ENST00000420779 380 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AL451054.2-201ENST00000420896 202 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AC007919.1-201ENST00000429380 217 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 RNA5SP200-201ENST00000516360 103 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 AL445984.1-201ENST00000637834 659 ntBASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
PKNOX2Q96KN3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 MIR208A-201ENST00000362287 71 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 RNU6-432P-201ENST00000384196 109 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 MIR620-201ENST00000385232 95 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 TXNP7-201ENST00000406296 293 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 MTND2P29-201ENST00000438595 412 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 RPL7P12-201ENST00000446719 750 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 MTCO1P27-201ENST00000448269 226 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 RPL22P13-201ENST00000493291 347 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 NRBF2P1-201ENST00000587407 859 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AL451007.1-201ENST00000595491 289 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AL596327.1-201ENST00000603629 213 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AC136601.2-201ENST00000604356 474 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AL133445.2-201ENST00000611191 527 ntBASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PKNOX2Q96KN3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 RNU4-92P-201ENST00000363783 136 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 RN7SKP51-201ENST00000410781 304 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 HSPE1P21-201ENST00000438283 308 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC134050.1-201ENST00000495088 933 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC010587.2-201ENST00000511727 448 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC107953.1-201ENST00000522216 297 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC023538.1-201ENST00000534576 736 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC006199.1-201ENST00000548728 219 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 UBE2L4-201ENST00000587688 464 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 ELOCP29-201ENST00000588193 334 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC002545.1-201ENST00000592511 181 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AL031274.2-201ENST00000599419 203 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AC107294.1-201ENST00000609524 467 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AL158801.5-201ENST00000623123 465 ntBASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PKNOX2Q96KN3 AP000776.1-201ENST00000530032 1663 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 GNG5P1-201ENST00000255500 204 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 RNA5SP387-201ENST00000364226 106 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 Y_RNA.333-201ENST00000365274 102 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 SNORA70.4-201ENST00000365509 134 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms