Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC108206.1-201ENST00000570186 4159 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 SNORA62.1-201ENST00000364287 154 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 MIR887-201ENST00000401258 79 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 RNU2-9P-201ENST00000410194 145 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 RPL36AP6-201ENST00000435770 321 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 RNU7-23P-201ENST00000459465 62 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 RPS27AP10-201ENST00000496103 208 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC109927.2-201ENST00000506416 303 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC020895.1-201ENST00000595362 272 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC012119.1-201ENST00000603184 222 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC008739.3-201ENST00000603262 127 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 NDUFA8P1-201ENST00000605525 367 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC064807.4-201ENST00000607201 407 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 AC110079.1-202ENST00000635213 138 ntBASIC3.97□□□□□ -1.77
CCDC136Q96JN2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC136Q96JN2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 RNU6-778P-201ENST00000363269 103 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 RNU6-1097P-201ENST00000363586 107 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AC010975.2-201ENST00000427781 588 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 ELOCP23-201ENST00000452014 332 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 RN7SL293P-201ENST00000481765 281 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 MTND2P33-201ENST00000506452 1031 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AC007458.1-201ENST00000542812 373 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 ADI1P3-201ENST00000549509 470 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AC008521.1-201ENST00000587471 187 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AC126118.1-201ENST00000607744 628 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AL359547.2-201ENST00000615810 418 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AC138649.3-201ENST00000622154 254 ntBASIC3.96□□□□□ -1.78
CCDC136Q96JN2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC136Q96JN2 CKAP2P1-201ENST00000555477 2049 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC103710.2-202ENST00000641454 2853 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC136Q96JN2 MTND4P35-201ENST00000604257 1375 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 Y_RNA.296-201ENST00000364930 108 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC136Q96JN2 RNU1-73P-201ENST00000383971 164 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 RNA5SP274-201ENST00000410484 108 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC080125.1-201ENST00000414888 684 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC063979.1-201ENST00000415539 377 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AL365496.1-201ENST00000426885 215 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC005300.1-201ENST00000428401 373 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 GTF2IP20-201ENST00000431663 360 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC136Q96JN2 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 RPL21P41-201ENST00000459863 264 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 RN7SL20P-201ENST00000488827 297 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC023194.1-201ENST00000493084 308 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC114786.4-201ENST00000508771 728 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC091133.4-201ENST00000511142 308 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC136Q96JN2 RNU6-1315P-201ENST00000517187 99 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC025449.1-201ENST00000603896 529 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC073657.2-201ENST00000605661 303 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 AC009161.2-201ENST00000624626 138 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.95□□□□□ -1.78
CCDC136Q96JN2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC136Q96JN2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CCDC136Q96JN2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC136Q96JN2 Y_RNA.159-201ENST00000363674 87 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 RNU5A-6P-201ENST00000384136 116 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 RNU6-1042P-201ENST00000384204 107 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 RNU6-658P-201ENST00000384606 106 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 Y_RNA.576-201ENST00000384781 102 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 MIR490-201ENST00000384865 128 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 GSTA9P-201ENST00000406231 611 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC136Q96JN2 RN7SKP220-201ENST00000410611 288 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC136Q96JN2 AL645937.1-202ENST00000421799 937 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 AC009414.1-201ENST00000427200 443 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 YME1L1P1-201ENST00000429435 297 ntBASIC3.94□□□□□ -1.78
CCDC136Q96JN2 RPL39P40-201ENST00000445481 146 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms