Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNU4-49P-201ENST00000516080 140 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RN7SKP256-201ENST00000517201 314 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 IGKV2-23-201ENST00000518729 323 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 HMGB1P41-201ENST00000520234 440 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC068587.5-201ENST00000528506 175 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 SCOCP1-201ENST00000554676 349 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 MIR5047-201ENST00000579212 100 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 MIR4742-201ENST00000581069 85 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC012493.2-201ENST00000595083 291 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AL355812.1-201ENST00000603215 216 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.812-201ENST00000610788 101 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 PART1_1.1-201ENST00000611761 217 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC093838.1-201ENST00000613014 469 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.784-201ENST00000613803 101 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.787-201ENST00000616522 101 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.780-201ENST00000617336 101 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.801-201ENST00000619005 101 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC040168.1-201ENST00000623594 991 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 MTND5P1-201ENST00000445440 1375 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.67-201ENST00000362870 100 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 U3.12-201ENST00000364498 214 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 RNU5E-6P-201ENST00000365574 115 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 SNORA32.2-201ENST00000384049 122 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.431-201ENST00000384086 102 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 TXNP7-201ENST00000406296 293 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 RNU2-39P-201ENST00000410604 198 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 RN7SKP140-201ENST00000411196 284 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 HMGB1P18-201ENST00000438801 619 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 MTND1P18-201ENST00000448191 573 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AL118520.1-201ENST00000450770 291 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC007547.1-201ENST00000462177 490 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AL049830.2-201ENST00000480072 201 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 RNU4-29P-201ENST00000515943 174 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 SNORD116-26-201ENST00000516006 96 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AL133271.1-201ENST00000538229 291 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 MIR4293-201ENST00000584305 78 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC007687.1-201ENST00000602704 304 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC007179.3-201ENST00000604976 235 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 MIR8057-201ENST00000620957 69 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 RMST_7.1-201ENST00000621935 268 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 AL136313.1-201ENST00000624804 202 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 MIR3651-201ENST00000630427 90 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 MIR1302-1-201ENST00000637932 143 ntBASIC3.22□□□□□ -1.89
LMO3Q8TAP4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMO3Q8TAP4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
LMO3Q8TAP4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 MIR208A-201ENST00000362287 71 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU6-989P-201ENST00000362756 107 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU6-552P-201ENST00000362869 119 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.100-201ENST00000363141 102 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.184-201ENST00000363884 108 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU6-960P-201ENST00000364056 120 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU6-522P-201ENST00000364497 107 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU6-1078P-201ENST00000364522 103 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AL590004.1-201ENST00000405321 300 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 SNORA11.1-201ENST00000408133 129 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU2-29P-201ENST00000410423 189 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU2-47P-201ENST00000410649 186 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC008065.1-201ENST00000428525 348 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RPS29P6-201ENST00000438196 145 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC005094.1-201ENST00000440420 368 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 HMGB3P21-201ENST00000452483 547 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU7-180P-201ENST00000459240 63 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 snoU13.22-201ENST00000459428 104 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RPL37P6-202ENST00000464216 403 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RPL23AP11-201ENST00000475260 469 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms