Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 MIR4529-201ENST00000578110 78 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AL355297.2-201ENST00000604792 129 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AL390208.1-201ENST00000605885 644 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC005296.1-201ENST00000616145 209 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC093875.1-201ENST00000623688 504 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC120349.2-201ENST00000625002 298 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AL356473.1-201ENST00000406203 1408 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 U8.3-201ENST00000363321 132 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 U8.14-201ENST00000390843 143 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AL353689.1-201ENST00000438895 199 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AC244505.3-201ENST00000454598 187 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AC022861.1-201ENST00000522981 663 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AC005951.2-201ENST00000576282 495 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AC105245.1-201ENST00000581934 244 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AL583856.2-201ENST00000606298 543 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AL158211.4-201ENST00000606988 584 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 uc_338.5-201ENST00000611839 155 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 AC078880.5-201ENST00000617845 421 ntBASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC112Q8NEF3 ADAM3A-203ENST00000461344 2157 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 CYCSP49-201ENST00000420810 319 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC008850.1-201ENST00000427546 362 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 RPL17P35-201ENST00000432217 549 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 SNORD121B-201ENST00000458838 81 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC104685.1-201ENST00000502445 371 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AF213884.2-201ENST00000510417 903 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 RNU6-334P-201ENST00000517072 102 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 OR8K2P-201ENST00000524645 927 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC005776.1-201ENST00000603164 290 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC068276.1-201ENST00000605793 379 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC005332.6-201ENST00000613178 446 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 MTND1P37-201ENST00000636562 264 ntBASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC112Q8NEF3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 AC005539.1-201ENST00000443768 1479 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 MIR888-201ENST00000401186 77 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 EDDM3CP-201ENST00000415977 425 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 MTCO2P5-201ENST00000422621 426 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 RPS3AP44-201ENST00000425466 790 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 NRON-201ENST00000517270 370 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 MTCO3P15-201ENST00000526563 574 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 AC022880.1-201ENST00000534017 973 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 AL359212.1-201ENST00000556608 614 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 AL391813.1-201ENST00000603098 260 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 AC011451.2-201ENST00000604303 598 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 AC013476.2-201ENST00000614456 459 ntBASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
CCDC112Q8NEF3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 RN7SKP101-201ENST00000411376 320 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 RPL23AP36-201ENST00000413895 458 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 BPY2DP-201ENST00000422208 265 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AL139421.1-201ENST00000423010 169 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AIMP1P2-201ENST00000425294 312 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 DPRXP1-201ENST00000426312 460 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 GTF2IP7-202ENST00000436677 309 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 HSPE1P21-201ENST00000438283 308 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC079776.3-201ENST00000450665 370 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 RPS20P20-201ENST00000460498 340 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC096745.1-201ENST00000509945 370 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AP005639.2-201ENST00000527592 928 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms