Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AC012213.3-201ENST00000577199 777 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AC060766.3-201ENST00000591442 263 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AC008739.2-201ENST00000597006 317 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AC104763.2-201ENST00000604179 382 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AL161734.1-201ENST00000609720 557 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 AC004852.3-201ENST00000614131 326 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 CR381653.2-201ENST00000624041 768 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 U2.21-201ENST00000637295 81 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.8□□□□□ -1.96
CCDC63Q8NA47 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CCDC63Q8NA47 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 MIR6073-201ENST00000352083 89 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 MIR134-201ENST00000385258 73 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 RPS12P24-201ENST00000412619 387 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC114491.1-201ENST00000416095 246 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 MED13P1-201ENST00000428342 171 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 HMGB1P27-201ENST00000431429 603 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 ARPC3P1-201ENST00000437218 533 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 CYCSP32-201ENST00000440548 321 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AL136380.1-201ENST00000447970 162 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 NIPA2P5-201ENST00000452282 464 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 RPS29P20-201ENST00000489592 171 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC105313.1-201ENST00000509121 353 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AP003072.2-201ENST00000527756 676 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC087883.1-201ENST00000551882 391 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC034105.4-201ENST00000568304 277 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC024619.4-201ENST00000580924 316 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 RPL23AP78-201ENST00000599928 470 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC010620.2-201ENST00000600135 313 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AL121992.2-201ENST00000606262 256 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC245008.1-201ENST00000608123 476 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC107294.1-201ENST00000609524 467 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC130324.3-201ENST00000614165 542 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 MIR7975-201ENST00000619350 68 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC099842.1-201ENST00000619919 596 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AL359693.1-201ENST00000614959 2407 ntBASIC2.79□□□□□ -1.96
CCDC63Q8NA47 AC026241.1-201ENST00000517873 2142 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 Y_RNA.126-201ENST00000363382 111 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 RNU6-884P-201ENST00000363889 107 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 Y_RNA.534-201ENST00000384599 112 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 RNA5SP181-201ENST00000410246 98 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 RNA5SP120-201ENST00000410900 112 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 BTF3L4P1-201ENST00000413813 468 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 SKA2P1-201ENST00000425592 390 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AL592045.1-201ENST00000429867 352 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 GPM6BP2-201ENST00000432046 144 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AL513043.1-201ENST00000439124 535 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 GPM6BP1-201ENST00000446387 144 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 RPL39P36-201ENST00000490784 156 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AC006445.1-201ENST00000491925 405 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 RN7SL504P-201ENST00000494496 287 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 RNU6-430P-201ENST00000517078 107 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 RNA5SP165-201ENST00000517142 115 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AL359212.1-201ENST00000556608 614 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 HMGN2P15-201ENST00000585707 270 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AC109347.2-201ENST00000610220 349 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 AL731566.2-201ENST00000618971 317 ntBASIC2.78□□□□□ -1.96
CCDC63Q8NA47 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC63Q8NA47 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms