Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.91□□□□□ -2.26
ABCA6Q8N139 AL365496.1-201ENST00000426885 215 ntBASIC0.9□□□□□ -2.26
ABCA6Q8N139 TPMTP4-201ENST00000450749 678 ntBASIC0.9□□□□□ -2.26
ABCA6Q8N139 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.9□□□□□ -2.26
ABCA6Q8N139 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
ABCA6Q8N139 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
ABCA6Q8N139 SNORA31.8-201ENST00000516327 108 ntBASIC0.9□□□□□ -2.26
ABCA6Q8N139 AC118273.2-201ENST00000532092 465 ntBASIC0.9□□□□□ -2.26
ABCA6Q8N139 OR6C7P-201ENST00000547875 934 ntBASIC0.9□□□□□ -2.26
ABCA6Q8N139 HSPE1P7-201ENST00000604681 321 ntBASIC0.9□□□□□ -2.26
ABCA6Q8N139 SNORD26-201ENST00000384147 75 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 U3.20-201ENST00000390909 217 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ABCA6Q8N139 MTND4P11-201ENST00000417020 1058 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 OR51AB1P-201ENST00000429046 620 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 RPL23AP35-201ENST00000451906 501 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 SNORA22-201ENST00000383907 134 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 SNORA22C-201ENST00000384614 134 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 HMGB3P31-201ENST00000413333 595 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 TMEM167AP1-201ENST00000423409 219 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 AC098934.3-201ENST00000430450 190 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 MTND5P15-201ENST00000434246 349 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 AC241584.1-201ENST00000438469 1241 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 AC092393.1-201ENST00000439625 742 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 AL161651.1-201ENST00000440882 223 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 RPS15AP27-201ENST00000449183 343 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 CYP4A27P-201ENST00000567218 190 ntBASIC0.89□□□□□ -2.27
ABCA6Q8N139 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA6Q8N139 AC087359.1-201ENST00000508335 1740 ntBASIC0.88□□□□□ -2.27
ABCA6Q8N139 Y_RNA.294-201ENST00000364916 102 ntBASIC0.88□□□□□ -2.27
ABCA6Q8N139 MIR1250-201ENST00000408098 113 ntBASIC0.88□□□□□ -2.27
ABCA6Q8N139 MTCYBP24-201ENST00000420387 1106 ntBASIC0.88□□□□□ -2.27
ABCA6Q8N139 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.88□□□□□ -2.27
ABCA6Q8N139 RPS20P10-201ENST00000451209 253 ntBASIC0.88□□□□□ -2.27
ABCA6Q8N139 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
ABCA6Q8N139 VTRNA1-3-201ENST00000365645 89 ntBASIC0.87□□□□□ -2.27
ABCA6Q8N139 MIR618-201ENST00000385287 98 ntBASIC0.87□□□□□ -2.27
ABCA6Q8N139 RNA5SP127-201ENST00000411051 133 ntBASIC0.87□□□□□ -2.27
ABCA6Q8N139 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.87□□□□□ -2.27
ABCA6Q8N139 AC096920.1-201ENST00000423991 241 ntBASIC0.87□□□□□ -2.27
ABCA6Q8N139 TPTE2P6-202ENST00000445572 1007 ntBASIC0.87□□□□□ -2.27
ABCA6Q8N139 RNU11-2P-201ENST00000516898 142 ntBASIC0.87□□□□□ -2.27
ABCA6Q8N139 AP003355.1-201ENST00000518956 587 ntBASIC0.87□□□□□ -2.27
ABCA6Q8N139 AC092474.3-201ENST00000603022 568 ntBASIC0.87□□□□□ -2.27
ABCA6Q8N139 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
ABCA6Q8N139 MT-TP-201ENST00000387461 68 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.86□□□□□ -2.27
ABCA6Q8N139 AC021749.1-201ENST00000604322 607 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.86□□□□□ -2.27
ABCA6Q8N139 AC243829.6-201ENST00000612652 106 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 AL355810.1-201ENST00000614629 552 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
ABCA6Q8N139 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
ABCA6Q8N139 SNORA25.8-201ENST00000364831 128 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 HNRNPDP2-201ENST00000406475 478 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 USP9YP33-201ENST00000412220 421 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 USP9YP35-201ENST00000435696 412 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 AC098591.2-201ENST00000510152 315 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.86□□□□□ -2.27
ABCA6Q8N139 AC008945.2-201ENST00000606056 604 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 AP002791.1-201ENST00000623291 381 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 LINC02211-204ENST00000642024 1070 ntBASIC0.86□□□□□ -2.27
ABCA6Q8N139 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ABCA6Q8N139 RNU1-72P-201ENST00000362976 153 ntBASIC0.85□□□□□ -2.27
ABCA6Q8N139 RN7SKP158-201ENST00000410453 326 ntBASIC0.85□□□□□ -2.27
ABCA6Q8N139 AC098592.2-201ENST00000413158 265 ntBASIC0.85□□□□□ -2.27
ABCA6Q8N139 AC099548.1-201ENST00000421443 426 ntBASIC0.85□□□□□ -2.27
ABCA6Q8N139 RPS27P23-201ENST00000487608 251 ntBASIC0.85□□□□□ -2.27
ABCA6Q8N139 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.85□□□□□ -2.27
ABCA6Q8N139 AC090132.2-201ENST00000615881 347 ntBASIC0.85□□□□□ -2.27
ABCA6Q8N139 MIR6086-201ENST00000638065 55 ntBASIC0.85□□□□□ -2.27
ABCA6Q8N139 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
ABCA6Q8N139 RNA5SP212-201ENST00000391223 107 ntBASIC0.84□□□□□ -2.28
ABCA6Q8N139 RPS3AP24-201ENST00000407896 734 ntBASIC0.84□□□□□ -2.28
ABCA6Q8N139 AL158823.1-201ENST00000418441 478 ntBASIC0.84□□□□□ -2.28
ABCA6Q8N139 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.84□□□□□ -2.28
ABCA6Q8N139 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.84□□□□□ -2.28
ABCA6Q8N139 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.84□□□□□ -2.28
ABCA6Q8N139 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.84□□□□□ -2.28
ABCA6Q8N139 AC133963.2-201ENST00000513686 578 ntBASIC0.84□□□□□ -2.28
ABCA6Q8N139 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.84□□□□□ -2.28
ABCA6Q8N139 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.84□□□□□ -2.28
ABCA6Q8N139 MIR3198-2-201ENST00000577868 80 ntBASIC0.84□□□□□ -2.28
ABCA6Q8N139 HSPE1P19-201ENST00000603327 295 ntBASIC0.84□□□□□ -2.28
ABCA6Q8N139 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
ABCA6Q8N139 KLF3P2-201ENST00000465138 268 ntBASIC0.83□□□□□ -2.28
ABCA6Q8N139 SDAD1P2-201ENST00000441308 2028 ntBASIC0.83□□□□□ -2.28
ABCA6Q8N139 MTND4P12-201ENST00000498999 1377 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms