Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 SKA2P1-201ENST00000425592 390 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC007560.1-201ENST00000426912 237 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 ELOCP14-201ENST00000428070 331 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 WARS2P1-201ENST00000429678 537 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC244035.1-201ENST00000430042 390 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 UBE2FP3-201ENST00000436366 524 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 ELOCP7-201ENST00000439968 331 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AL606662.1-201ENST00000445763 553 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 ELOCP30-201ENST00000447108 299 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 RPL23AP35-201ENST00000451906 501 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC109486.1-201ENST00000486833 374 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 GZMAP1-201ENST00000503054 631 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 TPT1P8-201ENST00000510120 555 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 RNU6-64P-201ENST00000517119 105 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 RNA5SP291-201ENST00000517222 105 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 DPPA3P3-201ENST00000603842 430 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 SNORD14A-201ENST00000606526 91 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC004908.2-201ENST00000609090 574 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC025594.3-201ENST00000613068 790 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AL449363.1-201ENST00000617815 186 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC022960.3-201ENST00000619794 441 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AL607023.1-201ENST00000620045 248 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 MIR6873-201ENST00000622788 63 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AL136313.1-201ENST00000624804 202 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AC103706.2-201ENST00000638080 240 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 MTND4P16-201ENST00000466108 1367 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 SNORA3A-201ENST00000364113 130 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 RNU6-1200P-201ENST00000384162 107 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 SNORA11.4-201ENST00000408823 129 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC098614.2-201ENST00000426040 255 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AL356320.1-201ENST00000429616 163 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC236972.1-201ENST00000433225 199 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 MTND1P28-201ENST00000435623 950 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 RPL7P36-201ENST00000444633 681 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 RPS15AP27-201ENST00000449183 343 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AL118520.1-201ENST00000450770 291 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 OR6C5P-201ENST00000452388 923 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 RNU7-59P-201ENST00000459101 61 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC104685.1-201ENST00000502445 371 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 MTND5P13-201ENST00000513046 1079 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 SNORA31.3-201ENST00000516029 96 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 RN7SKP258-201ENST00000517151 304 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC022634.1-201ENST00000520765 532 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC068587.4-201ENST00000533893 186 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC023050.2-201ENST00000544968 387 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 MIR4999-201ENST00000585029 91 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 BNIP3P23-201ENST00000599655 511 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AC027449.1-201ENST00000608890 407 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AL391813.2-201ENST00000609113 322 ntBASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC65Q8IXS2 AL359851.1-201ENST00000569460 4997 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 KPNA2P1-201ENST00000458289 1591 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 RNU6-778P-201ENST00000363269 103 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 RNA5SP37-201ENST00000365420 130 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 RNU6-920P-201ENST00000410926 92 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AL135786.1-201ENST00000415892 214 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 SEPT2P1-201ENST00000419651 180 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 BPY2DP-201ENST00000422208 265 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 SNRPEP9-201ENST00000436794 238 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 CECR9-201ENST00000453421 199 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC013267.1-201ENST00000458227 267 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC008413.1-201ENST00000511864 177 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 RNU6-390P-201ENST00000516259 103 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC018714.1-201ENST00000605028 208 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC004805.2-201ENST00000605382 482 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AL121917.1-203ENST00000605534 577 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 AL050303.3-201ENST00000613704 284 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms