Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FTX_3.1-201ENST00000610451 147 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 TUG1_2.1-201ENST00000614234 87 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 MIR6715A-201ENST00000615929 79 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AL162373.1-201ENST00000620433 407 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AL078595.3-201ENST00000623815 1166 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 RNU6-83P-201ENST00000384568 112 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 SSR1P2-201ENST00000415208 787 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC096649.2-201ENST00000416186 393 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 UBE2FP1-201ENST00000416536 447 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 UBE2FP3-201ENST00000436366 524 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 RPL35AP22-201ENST00000436855 335 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 USP9YP8-201ENST00000441913 500 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 TPT1P14-201ENST00000448018 505 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AL513124.1-201ENST00000450410 614 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC034222.1-201ENST00000494052 532 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC093809.1-201ENST00000509155 340 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC023538.1-201ENST00000534576 736 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 MTND4P33-201ENST00000556706 766 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 MIR5571-201ENST00000577998 113 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC060771.1-201ENST00000582031 164 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC245884.10-201ENST00000597355 337 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AL391001.1-201ENST00000602747 715 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 RNU6-88P-201ENST00000606801 100 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AC010133.1-201ENST00000615809 842 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 PCMTD1P7-201ENST00000634506 357 ntBASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDKL3Q8IVW4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RNU6-157P-201ENST00000383957 107 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 CIR1P3-201ENST00000405137 479 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 TXNP7-201ENST00000406296 293 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RN7SKP266-201ENST00000410232 287 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RNU6-584P-201ENST00000410350 95 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RNU2-49P-201ENST00000410666 184 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AL451054.2-201ENST00000420896 202 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RSU1P2-202ENST00000437884 485 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RPL23AP35-201ENST00000451906 501 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC072039.1-201ENST00000477611 581 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 RPS15AP36-201ENST00000492022 382 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AL359212.1-201ENST00000556608 614 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 DUXAP1-201ENST00000556632 463 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 MIR1273D-201ENST00000577266 86 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AF038458.1-201ENST00000588406 262 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AP001486.3-201ENST00000615334 372 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC022960.3-201ENST00000619794 441 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AL356596.1-201ENST00000624230 379 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AC006927.4-201ENST00000639187 543 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
CDKL3Q8IVW4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.09□□□□□ -2.08
CDKL3Q8IVW4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 RNU6-723P-201ENST00000383973 107 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 MIR513B-201ENST00000385136 84 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 RNU6-750P-201ENST00000390946 107 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 SNORA3.2-201ENST00000408221 125 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 AC023141.4-201ENST00000412031 328 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 AL139156.1-201ENST00000412785 841 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 CYCSP48-201ENST00000417124 323 ntBASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.08□□□□□ -2.08
CDKL3Q8IVW4 CR769776.1-201ENST00000441254 787 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms