Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC137800.2-201ENST00000574375 120 ntBASIC2.62□□□□□ -1.99
CCDC71Q8IV32 AC040904.1-201ENST00000590850 223 ntBASIC2.62□□□□□ -1.99
CCDC71Q8IV32 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC71Q8IV32 RSL24D1P11-201ENST00000591045 491 ntBASIC2.62□□□□□ -1.99
CCDC71Q8IV32 AL358072.1-201ENST00000604156 575 ntBASIC2.62□□□□□ -1.99
CCDC71Q8IV32 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC71Q8IV32 AC107294.1-201ENST00000609524 467 ntBASIC2.62□□□□□ -1.99
CCDC71Q8IV32 AC109347.2-201ENST00000610220 349 ntBASIC2.62□□□□□ -1.99
CCDC71Q8IV32 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CCDC71Q8IV32 AC009509.4-201ENST00000619202 509 ntBASIC2.62□□□□□ -1.99
CCDC71Q8IV32 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC71Q8IV32 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC71Q8IV32 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC71Q8IV32 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC71Q8IV32 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 HSPE1P11-201ENST00000339579 310 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 FTLP6-201ENST00000355274 422 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 Y_RNA.201-201ENST00000364052 96 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 RNU6-960P-201ENST00000364056 120 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 FO393413.1-201ENST00000402892 195 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 NDUFS5P1-201ENST00000405668 289 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 RNU2-33P-201ENST00000410344 192 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 RNU2-36P-201ENST00000410361 191 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AL512844.2-201ENST00000433990 593 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 RPL36AP6-201ENST00000435770 321 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC104850.1-201ENST00000435940 476 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 HMGB3P12-201ENST00000438745 556 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 Z82210.1-201ENST00000440037 231 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 BNIP3P2-201ENST00000441221 577 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 PIGFP3-201ENST00000441918 722 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC244505.5-201ENST00000443639 207 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AL135752.1-201ENST00000479477 471 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 RN7SL432P-201ENST00000484057 298 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 SEM1P1-201ENST00000506694 209 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC006445.2-201ENST00000510061 472 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC079140.3-201ENST00000511111 550 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC022447.1-201ENST00000515358 464 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 RNA5SP291-201ENST00000517222 105 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AP006587.4-201ENST00000526053 529 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 ELOCP31-201ENST00000540463 467 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AMZ2P1-203ENST00000565833 850 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 MIR4528-201ENST00000577763 90 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 MIR3167-201ENST00000579623 85 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AL161729.4-201ENST00000604650 476 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AL035413.2-201ENST00000604801 525 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC064872.1-201ENST00000604823 1072 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 ATP1B3P1-201ENST00000605365 821 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC010678.1-201ENST00000614118 713 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 AC034102.8-201ENST00000615146 484 ntBASIC2.61□□□□□ -1.99
CCDC71Q8IV32 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC71Q8IV32 SNORD56.2-201ENST00000363242 71 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 RNU6-348P-201ENST00000384386 107 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 RPS3AP36-201ENST00000398190 775 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC127391.1-201ENST00000411737 98 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 HMGN2P35-201ENST00000412164 270 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AL592148.1-201ENST00000413568 445 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 CDK8P2-201ENST00000415020 547 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC007283.2-201ENST00000424739 197 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AL353706.1-201ENST00000436728 494 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC073614.1-201ENST00000438690 650 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC108938.1-201ENST00000451204 136 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AL160314.1-201ENST00000490836 438 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 Vault.3-201ENST00000516676 95 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 SNORA18.6-201ENST00000516792 115 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 RNU6-1092P-201ENST00000516955 87 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC024909.2-201ENST00000553035 286 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 MIR3162-201ENST00000581818 82 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AL133173.2-201ENST00000614270 90 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AP003122.6-201ENST00000623831 495 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 AC110994.2-201ENST00000635481 492 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 OR5H6-203ENST00000642105 978 ntBASIC2.6□□□□□ -1.99
CCDC71Q8IV32 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC71Q8IV32 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms