Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 Y_RNA.539-201ENST00000384635 107 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 MIR1303-201ENST00000408625 86 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC127526.1-201ENST00000417526 366 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 RPS12P23-201ENST00000419579 400 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AL953862.1-201ENST00000423016 168 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 ERLEC1P1-201ENST00000433806 578 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC011816.1-201ENST00000441346 546 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 snoU13.22-201ENST00000459428 104 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 S100A11P1-201ENST00000477525 312 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 RNU6-714P-201ENST00000516963 103 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AP003385.6-201ENST00000531603 374 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 BNIP3P6-201ENST00000549284 499 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 SETP7-201ENST00000552169 453 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 CYCSP2-201ENST00000558168 301 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC090751.1-201ENST00000566966 267 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AL390838.2-201ENST00000602394 274 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AL161734.1-201ENST00000609720 557 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC084757.4-201ENST00000616350 526 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC018926.3-201ENST00000618841 406 ntBASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.52□□□□□ -1.85
BHLHA9Q7RTU4 AL136964.1-201ENST00000622038 2990 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 MTCO1P14-201ENST00000441695 1559 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AC091812.1-201ENST00000432235 1948 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 HMGB1P5-201ENST00000255320 642 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RNU1-70P-201ENST00000362618 164 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RNU6-545P-201ENST00000362681 104 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 Y_RNA.167-201ENST00000363735 109 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 Y_RNA.270-201ENST00000364693 104 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 MIR34B-201ENST00000385076 84 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AC110754.1-201ENST00000399740 601 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL139397.2-201ENST00000404529 772 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RPL23AP47-201ENST00000408017 460 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RNU6-954P-201ENST00000411355 107 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL158071.1-201ENST00000430315 461 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RPS6P12-201ENST00000432491 726 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 PRSS3P4-201ENST00000453323 162 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RPL7P49-201ENST00000471402 708 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RN7SKP24-201ENST00000515888 284 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 Y_RNA.700-201ENST00000516806 100 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 COX6B1P6-201ENST00000522347 255 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 DEFB131D-201ENST00000526803 184 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 OR4P1P-201ENST00000530808 1136 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AP002770.2-201ENST00000543613 532 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 GLUD1P4-201ENST00000590914 418 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AC006557.5-201ENST00000603126 811 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 SRGNP1-201ENST00000603392 451 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 BNIP3P4-201ENST00000604946 565 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AC007179.3-201ENST00000604976 235 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL021879.1-201ENST00000611756 288 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL133383.2-201ENST00000622958 2336 ntBASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
BHLHA9Q7RTU4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 OR11H5P-202ENST00000641612 1325 ntBASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 ENSAP3-201ENST00000312710 333 ntBASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 RNU5E-1-201ENST00000362477 120 ntBASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 RNA5SP391-201ENST00000363456 119 ntBASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 RNU4-1-201ENST00000363925 141 ntBASIC3.5□□□□□ -1.85
BHLHA9Q7RTU4 SNORD46.1-201ENST00000364139 104 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms