Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 MIR4658-201ENST00000584344 65 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 OR6C72P-201ENST00000451403 892 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.3□□□□□ -2.36
VPS13CQ709C8 AL589935.2-201ENST00000616471 1231 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
VPS13CQ709C8 XKRY2-202ENST00000623874 1581 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 XKRY-202ENST00000624960 1581 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.3□□□□□ -2.36
VPS13CQ709C8 RNU1-58P-201ENST00000362413 163 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 RNU1-72P-201ENST00000362976 153 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 MIR1468-201ENST00000410600 86 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS13CQ709C8 AL157398.1-201ENST00000452981 186 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 RPL21P104-201ENST00000464143 478 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 Y_RNA.654-201ENST00000497848 106 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 AC008083.4-201ENST00000615076 444 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 Pinc.1-201ENST00000616452 154 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 CFTRP2-201ENST00000634304 199 ntBASIC0.3□□□□□ -2.36
VPS13CQ709C8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS13CQ709C8 TOMM22P2-201ENST00000430735 237 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 RNU6-1320P-201ENST00000390838 107 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 RNU6-1269P-201ENST00000391139 107 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 AC083875.1-201ENST00000419509 405 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 AC079448.1-201ENST00000449377 373 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 snoU13.11-201ENST00000459219 104 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 RNU6-599P-201ENST00000459383 107 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 RNU6-1193P-201ENST00000459461 107 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 SNORD124-201ENST00000459577 104 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 EIF4EP3-201ENST00000498782 656 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 AL355472.4-201ENST00000610233 626 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 RNU6-368P-201ENST00000620928 107 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 RNU6-538P-201ENST00000622329 107 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 AP003476.1-201ENST00000623984 516 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 AL356131.1-201ENST00000405826 414 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 RNU6-733P-201ENST00000410759 104 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS13CQ709C8 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS13CQ709C8 PRPS1P1-201ENST00000445305 876 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 EIF4EP5-201ENST00000528228 640 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 OR5AL2P-201ENST00000532185 920 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 MIR5190-201ENST00000581537 80 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS13CQ709C8 AP000776.1-201ENST00000530032 1663 ntBASIC0.29□□□□□ -2.36
VPS13CQ709C8 MIR214-201ENST00000385214 110 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 MIR934-201ENST00000401241 83 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 RNA5SP450-201ENST00000411206 102 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 UBE2FP1-201ENST00000416536 447 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 MTCO3P4-201ENST00000419236 787 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 HMGN2P30-201ENST00000423237 256 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 AL133507.1-201ENST00000605269 557 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 Y_RNA.552-201ENST00000384665 112 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 AC013268.2-201ENST00000420753 337 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 AC098862.1-201ENST00000504991 413 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.28□□□□□ -2.36
VPS13CQ709C8 AL138726.1-201ENST00000614873 333 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 AC109454.4-201ENST00000623411 649 ntBASIC0.28□□□□□ -2.36
VPS13CQ709C8 AC096649.2-201ENST00000416186 393 ntBASIC0.28□□□□□ -2.37
VPS13CQ709C8 RPL7P29-201ENST00000437151 728 ntBASIC0.28□□□□□ -2.37
VPS13CQ709C8 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.28□□□□□ -2.37
VPS13CQ709C8 MIR3117-201ENST00000584034 78 ntBASIC0.28□□□□□ -2.37
VPS13CQ709C8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.28□□□□□ -2.37
VPS13CQ709C8 Y_RNA.453-201ENST00000384223 109 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 AC093027.1-201ENST00000546698 429 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13CQ709C8 RNU6-349P-201ENST00000362402 107 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 CD24P4-201ENST00000382840 243 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 HMGB1P17-201ENST00000403495 628 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 RNA5SP118-201ENST00000410385 109 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 OFD1P18Y-201ENST00000420889 959 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13CQ709C8 MTCO2P22-201ENST00000603246 681 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 RNU1-96P-201ENST00000364163 162 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 SNORA7.2-201ENST00000364446 145 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 MIR604-201ENST00000384880 94 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 PRELID3BP11-201ENST00000414230 479 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS13CQ709C8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS13CQ709C8 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.27□□□□□ -2.37
VPS13CQ709C8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
VPS13CQ709C8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
VPS13CQ709C8 SNORA62.5-201ENST00000516634 120 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
VPS13CQ709C8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.27□□□□□ -2.37
VPS13CQ709C8 AL590705.4-201ENST00000532209 134 ntBASIC0.27□□□□□ -2.37
VPS13CQ709C8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13CQ709C8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
VPS13CQ709C8 RNA5SP98-201ENST00000363158 137 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms