Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC116096.1-201ENST00000566804 2314 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 Y_RNA.31-201ENST00000362574 102 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 RNU6-395P-201ENST00000365662 106 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 MIR708-201ENST00000390708 88 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 Z99755.1-201ENST00000414048 380 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 HMGN2P21-201ENST00000447764 270 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 AL358232.1-201ENST00000448030 501 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 ABCF2P2-201ENST00000450549 296 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 RNU6-307P-201ENST00000516743 106 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 AC025423.5-201ENST00000550230 219 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 MIR3944-201ENST00000581277 108 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 AC098826.3-201ENST00000603823 466 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 RMST_4.1-201ENST00000616886 107 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 MIR6500-201ENST00000622700 86 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 Z99571.1-201ENST00000636677 394 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 OR4G2P-202ENST00000641004 1759 ntBASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 RNU6-1115P-201ENST00000362490 106 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 SNORA7.2-201ENST00000364446 145 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 SNORA75.6-201ENST00000391318 127 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 HSPE1P12-201ENST00000412576 301 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC018865.2-201ENST00000423631 129 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AL590632.1-201ENST00000424289 371 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AL592045.1-201ENST00000429867 352 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 TBCAP1-201ENST00000436520 327 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 RPS24P13-201ENST00000442520 397 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 snoU13.4-201ENST00000458916 104 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 RN7SL585P-201ENST00000470538 280 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 MIR4444-1-201ENST00000581696 74 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 MIR4444-2-201ENST00000584390 74 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC008737.2-201ENST00000599446 118 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AL606490.9-201ENST00000603331 271 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AL161798.1-201ENST00000604630 131 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC009229.3-201ENST00000608056 282 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC112200.1-201ENST00000625015 234 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 AC007390.2-201ENST00000606229 3803 ntBASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RUFY4Q6ZNE9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AL049641.1-201ENST00000441055 1948 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 Y_RNA.252-201ENST00000364556 101 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 RNU6-1329P-201ENST00000365664 107 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 MIR1179-201ENST00000408703 91 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 Y_RNA.594-201ENST00000410373 140 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 CYP4F29P-201ENST00000420685 446 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 GPM6BP2-201ENST00000432046 144 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 MTND3P2-201ENST00000438452 342 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 GPM6BP1-201ENST00000446387 144 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AL160314.1-201ENST00000490836 438 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 SUMO2P6-201ENST00000505273 288 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 MTND3P25-201ENST00000509243 135 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AC092436.3-201ENST00000511788 257 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 SNORA31.8-201ENST00000516327 108 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AL157871.3-201ENST00000557231 293 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AC005899.2-201ENST00000584353 90 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AL161423.1-201ENST00000613700 262 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 AL078596.1-201ENST00000624856 447 ntBASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.55□□□□□ -1.68
RUFY4Q6ZNE9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms