Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.3□□□□□ -1.72
E4F1Q66K89 AL358176.2-201ENST00000425769 204 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 USMG5P1-201ENST00000425964 177 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AC083863.1-201ENST00000438811 231 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 RANP8-201ENST00000444720 713 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 RPL21P23-201ENST00000446654 460 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 RPL12P25-201ENST00000455592 494 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 RPL7P5-201ENST00000471472 736 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AC103987.1-201ENST00000473394 348 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AL135752.1-201ENST00000479477 471 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AC018437.1-201ENST00000492214 406 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 RN7SL604P-201ENST00000492589 296 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 SNORA25.10-201ENST00000515926 124 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 RNU6-699P-201ENST00000517081 110 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.3□□□□□ -1.72
E4F1Q66K89 AC090877.1-201ENST00000561418 344 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AC025627.2-201ENST00000576220 160 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
E4F1Q66K89 AC011494.1-201ENST00000596454 237 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AC107294.1-201ENST00000609524 467 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AL591424.2-201ENST00000617023 128 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AL132822.1-201ENST00000617063 513 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 SNORD39.4-201ENST00000620099 78 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.3□□□□□ -1.72
E4F1Q66K89 MIR3653-201ENST00000625572 110 ntBASIC4.3□□□□□ -1.72
E4F1Q66K89 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.3□□□□□ -1.72
E4F1Q66K89 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
E4F1Q66K89 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
E4F1Q66K89 ZNF807-201ENST00000328088 1707 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
E4F1Q66K89 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
E4F1Q66K89 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
E4F1Q66K89 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.29□□□□□ -1.72
E4F1Q66K89 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
E4F1Q66K89 DEFB108F-201ENST00000344638 222 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RNU6-1167P-201ENST00000363227 94 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 Y_RNA.151-201ENST00000363566 112 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 Y_RNA.158-201ENST00000363651 101 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
E4F1Q66K89 RNU6-1032P-201ENST00000384100 107 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RNU6-196P-201ENST00000384315 107 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 MIR517A-201ENST00000385001 87 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 MIR1251-201ENST00000408552 70 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RPS15AP6-201ENST00000420703 385 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 AC091390.3-201ENST00000426478 338 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RSL24D1P6-201ENST00000426934 401 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 HMGB1P37-201ENST00000439613 609 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.29□□□□□ -1.72
E4F1Q66K89 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.29□□□□□ -1.72
E4F1Q66K89 BTF3P15-201ENST00000455606 336 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RPL23AP31-201ENST00000456160 467 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 SNORD5.1-201ENST00000458800 75 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 AC087588.1-201ENST00000462203 316 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RPS29P22-201ENST00000472363 168 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.29□□□□□ -1.72
E4F1Q66K89 AC022493.2-201ENST00000506122 481 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RNU6-470P-201ENST00000515954 104 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RNU6-120P-201ENST00000516077 103 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 RNA5SP384-201ENST00000516615 116 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 MIR4330-201ENST00000579077 105 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 MIR3138-201ENST00000585238 82 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 OR1M4P-201ENST00000589199 287 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
E4F1Q66K89 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.29□□□□□ -1.72
E4F1Q66K89 MIR6868-201ENST00000611215 58 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 AC005344.1-201ENST00000613391 459 ntBASIC4.29□□□□□ -1.72
E4F1Q66K89 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.29□□□□□ -1.72
E4F1Q66K89 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
E4F1Q66K89 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
E4F1Q66K89 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
E4F1Q66K89 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
E4F1Q66K89 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
E4F1Q66K89 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
E4F1Q66K89 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
E4F1Q66K89 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
E4F1Q66K89 RNU6-1329P-201ENST00000365664 107 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 MIR301A-201ENST00000385261 86 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 AL445529.1-201ENST00000398713 389 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 HLFP1-201ENST00000402375 499 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 AC002075.2-201ENST00000425207 252 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 AL645568.3-201ENST00000433683 316 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.28□□□□□ -1.72
E4F1Q66K89 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.28□□□□□ -1.72
E4F1Q66K89 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.28□□□□□ -1.72
E4F1Q66K89 RPS23P1-201ENST00000491662 432 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.28□□□□□ -1.72
E4F1Q66K89 AC008716.1-201ENST00000511084 513 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 RNU6-1315P-201ENST00000517187 99 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 AC087369.1-201ENST00000520775 996 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.28□□□□□ -1.72
E4F1Q66K89 U7.8-201ENST00000619968 63 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 AL360181.4-201ENST00000621752 134 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.28□□□□□ -1.72
E4F1Q66K89 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.28□□□□□ -1.72
E4F1Q66K89 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.28□□□□□ -1.72
E4F1Q66K89 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
E4F1Q66K89 Z82217.1-201ENST00000625157 8149 ntBASIC4.28□□□□□ -1.72
E4F1Q66K89 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
E4F1Q66K89 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms