Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6-166P-201ENST00000384371 107 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 RNU6-658P-201ENST00000384606 106 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 RNA5SP252-201ENST00000391131 119 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AL356057.2-201ENST00000403318 432 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 RPL7P10-201ENST00000417407 739 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 HMGB1P9-201ENST00000429856 646 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AL158071.1-201ENST00000430315 461 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AL627311.1-201ENST00000431514 115 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AL583843.1-201ENST00000456070 346 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AP000852.1-201ENST00000472460 573 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 RPS4XP22-201ENST00000480755 780 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AC010486.1-201ENST00000511793 424 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 MIR892C-201ENST00000516410 77 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 MIR3939-201ENST00000582614 106 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 MIR6716-201ENST00000613413 80 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 U6.98-201ENST00000637157 84 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AC233263.6-201ENST00000631132 1963 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AP004289.2-201ENST00000444413 1457 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 RNY3P14-201ENST00000384309 102 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 MIR199A2-201ENST00000385289 110 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 PTMAP5-201ENST00000393073 333 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AL022722.2-201ENST00000402519 180 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AL513185.2-201ENST00000425543 193 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AL691449.1-201ENST00000426570 421 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 BX679664.1-201ENST00000434429 253 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AL714022.1-201ENST00000439897 151 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 MTCO2P3-201ENST00000442543 421 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 RPL21P11-201ENST00000461458 483 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AC002456.2-201ENST00000509356 380 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 SNORA20.3-201ENST00000516880 132 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 RN7SKP209-201ENST00000516888 304 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 RNU6-711P-201ENST00000517255 106 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 RPL7P20-201ENST00000520308 745 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AL163153.1-201ENST00000554223 283 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 PSMA3P-201ENST00000555485 635 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 TGIF1P1-201ENST00000558095 802 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 MIR4700-201ENST00000578311 74 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AC011712.1-201ENST00000588959 234 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 MTND4LP5-201ENST00000605152 292 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 ATP1B3P1-201ENST00000605365 821 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 RMST_4.1-201ENST00000616886 107 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 AC091152.2-201ENST00000591628 2569 ntBASIC3.6□□□□□ -1.83
RNF220Q5VTB9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RNF220Q5VTB9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 MIR30E-201ENST00000362104 92 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 SNORD3E-201ENST00000362899 217 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.167-201ENST00000363735 109 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 U3.12-201ENST00000364498 214 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.530-201ENST00000384587 101 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RPS26P8-201ENST00000393490 348 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 EIF4E2P1-201ENST00000393781 255 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RPL5P18-201ENST00000406671 891 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RNU2-3P-201ENST00000410144 191 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RNU6-55P-201ENST00000411092 107 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RNU6-954P-201ENST00000411355 107 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AL592148.1-201ENST00000413568 445 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RPLP0P7-201ENST00000416050 667 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AL356095.1-201ENST00000417217 199 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RPL21P111-201ENST00000418453 477 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AC010618.1-201ENST00000469924 477 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AC128713.1-201ENST00000471495 306 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AC011005.2-201ENST00000487324 359 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AC083904.1-201ENST00000487828 231 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RNU1-86P-201ENST00000516108 154 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 SNORA14.1-201ENST00000516113 141 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RNU1-107P-201ENST00000516617 154 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms