Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 HMGB1P50-201ENST00000605814 607 ntBASIC4.03□□□□□ -1.76
ATP13A4Q4VNC1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.03□□□□□ -1.76
ATP13A4Q4VNC1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATP13A4Q4VNC1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.03□□□□□ -1.76
ATP13A4Q4VNC1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
ATP13A4Q4VNC1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC006026.1-201ENST00000444025 1803 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 Y_RNA.384-201ENST00000383909 102 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 SNORA75B-201ENST00000384053 137 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 RNU1-13P-201ENST00000384499 162 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AL591034.1-201ENST00000407447 340 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 RNU2-68P-201ENST00000410878 191 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 MYL8P-204ENST00000431574 518 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 SNRPEP9-201ENST00000436794 238 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AL135752.1-201ENST00000479477 471 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 HMGB3P15-201ENST00000507326 574 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 RNA5SP208-201ENST00000516156 78 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 RNA5SP143-201ENST00000516936 115 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 RNA5SP454-201ENST00000517231 127 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC069113.1-201ENST00000517763 267 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC087854.1-201ENST00000519706 414 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC007224.1-201ENST00000564410 144 ntBASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATP13A4Q4VNC1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AF117829.1-206ENST00000621883 3802 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 MIR412-201ENST00000362142 91 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 Y_RNA.58-201ENST00000362807 102 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 Y_RNA.67-201ENST00000362870 100 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 Y_RNA.135-201ENST00000363439 95 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 Y_RNA.154-201ENST00000363624 102 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RNY3P1-201ENST00000365085 102 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 Y_RNA.339-201ENST00000365325 102 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RNY3-201ENST00000365484 102 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RNU6-128P-201ENST00000383976 107 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 Y_RNA.490-201ENST00000384413 102 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RNU6-140P-201ENST00000384566 108 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RNU1-89P-201ENST00000384592 164 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 MIR548K-201ENST00000408406 116 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RNU2-3P-201ENST00000410144 191 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RPS20P15-201ENST00000412792 311 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AL139396.1-201ENST00000421137 167 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 TMEM167AP1-201ENST00000423409 219 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 MTND4P17-201ENST00000470444 350 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AC146944.2-203ENST00000502493 354 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AC139495.1-202ENST00000513164 354 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AC009902.1-201ENST00000519351 183 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 COPS8P3-201ENST00000526024 482 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AL356055.1-201ENST00000602528 446 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 MIR486-1-201ENST00000612171 68 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AL138726.1-201ENST00000614873 333 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RMST_4.1-201ENST00000616886 107 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 MIR6500-201ENST00000622700 86 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AC099506.2-201ENST00000623074 221 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 RNA5SP196-201ENST00000625967 102 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 ZNF807-201ENST00000328088 1707 ntBASIC4.01□□□□□ -1.77
ATP13A4Q4VNC1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 CUL1P1-201ENST00000509510 2425 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 RNA5SP515-201ENST00000364570 118 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 RNA5SP283-201ENST00000365604 119 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 SNORD116-11-201ENST00000383882 92 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 Y_RNA.387-201ENST00000383918 102 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 HMGN2P8-201ENST00000391458 268 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 HLFP1-201ENST00000402375 499 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 MIR548F5-201ENST00000408421 86 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 AC074085.1-201ENST00000413598 418 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 CYCSP33-201ENST00000414485 327 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 MTND1P14-201ENST00000427400 950 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 AL117339.2-201ENST00000430475 180 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4□□□□□ -1.77
ATP13A4Q4VNC1 SNRPEP4-201ENST00000435815 279 ntBASIC4□□□□□ -1.77
ATP13A4Q4VNC1 RPL32P28-201ENST00000443577 397 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms