Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 FAT1P1-201ENST00000406588 507 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 Y_RNA.619-201ENST00000410951 90 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 Z85995.1-201ENST00000415547 335 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 MTATP6P18-201ENST00000417994 673 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 MTCO2P19-201ENST00000427513 598 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 SNRPEP4-201ENST00000435815 279 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 MTND4P25-201ENST00000441039 533 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 FABP5P13-201ENST00000452144 328 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC022364.2-201ENST00000457963 554 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC012181.1-201ENST00000479895 423 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC116562.3-201ENST00000506136 177 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 CASP1P1-201ENST00000526345 212 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC068587.5-201ENST00000528506 175 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC025449.1-201ENST00000603896 529 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC104763.2-201ENST00000604179 382 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC004492.1-201ENST00000607036 742 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 AC008536.2-201ENST00000607284 349 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 AF250324.2-201ENST00000608299 610 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 SEPT14P19-203ENST00000633205 211 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
USP41Q3LFD5 MTND5P19-201ENST00000424872 1794 ntBASIC3.25□□□□□ -1.89
USP41Q3LFD5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP41Q3LFD5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP41Q3LFD5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 MTCO3P40-201ENST00000392516 676 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 PSPHP1-201ENST00000450062 261 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 RPL37P6-201ENST00000460682 294 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 RPL7P5-201ENST00000471472 736 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 RPS20P22-201ENST00000473700 357 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC126389.1-201ENST00000477436 290 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 KC877373.1-201ENST00000479066 408 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 RPL30P5-201ENST00000494923 336 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC108078.2-201ENST00000510750 236 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 RNA5SP291-201ENST00000517222 105 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 OR5B19P-201ENST00000531766 928 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC012507.3-201ENST00000603556 477 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC008962.1-201ENST00000605729 304 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC009570.1-201ENST00000609599 745 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC068831.7-201ENST00000616954 363 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.24□□□□□ -1.89
USP41Q3LFD5 AC007785.2-201ENST00000598627 1916 ntBASIC3.24□□□□□ -1.89
USP41Q3LFD5 CUL1P1-201ENST00000509510 2425 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 AL079305.1-201ENST00000623159 3008 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 RNU6-179P-201ENST00000363350 107 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 RNU6-741P-201ENST00000383889 107 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 RNU6-190P-201ENST00000384154 102 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 SNORA24.1-201ENST00000384401 135 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 RNU6-14P-201ENST00000384630 106 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC068050.1-201ENST00000394891 380 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 Y_RNA.599-201ENST00000410489 109 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 RN7SKP123-201ENST00000410732 291 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP41Q3LFD5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP41Q3LFD5 ISCA1P1-201ENST00000426679 387 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 BNIP3P2-201ENST00000441221 577 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC093899.1-201ENST00000457984 376 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 RNU6-953P-201ENST00000459154 107 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC006512.1-201ENST00000468816 291 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC083906.5-201ENST00000503722 328 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 SNORA31.3-201ENST00000516029 96 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP41Q3LFD5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP41Q3LFD5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.23□□□□□ -1.89
USP41Q3LFD5 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
USP41Q3LFD5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms