Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 SNORA31.25-201ENST00000517242 134 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC118273.2-201ENST00000532092 465 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC008269.2-201ENST00000561915 1105 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 UBE2L4-201ENST00000587688 464 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC010738.1-201ENST00000604970 987 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC055876.5-201ENST00000605667 259 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC006270.3-201ENST00000605967 1036 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CACNA1EQ15878 Y_RNA.518-201ENST00000384552 113 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 RPS3AP24-201ENST00000407896 734 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AL133384.1-201ENST00000412744 351 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC097499.1-201ENST00000444277 208 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 ANKRD26P4-201ENST00000455755 950 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 OR5AK1P-201ENST00000524837 922 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 OR5AL2P-201ENST00000532185 920 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 AL450336.1-201ENST00000605180 586 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC135507.1-201ENST00000607214 561 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 AL590396.2-201ENST00000636511 1041 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 U3.29-201ENST00000391296 212 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AL022238.1-201ENST00000442557 355 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC092757.1-201ENST00000467293 467 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AP005639.2-201ENST00000527592 928 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 SNORA23-201ENST00000365128 182 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 AL136372.1-201ENST00000403060 228 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC012497.1-201ENST00000429392 575 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC023141.11-201ENST00000508864 202 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 RNU6-760P-201ENST00000516078 97 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 AP003072.2-201ENST00000527756 676 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.81□□□□□ -2.28
CACNA1EQ15878 AL360181.4-201ENST00000621752 134 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 AC024595.1-201ENST00000623088 387 ntBASIC0.81□□□□□ -2.28
CACNA1EQ15878 U8.3-201ENST00000363321 132 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AL356432.1-201ENST00000405809 419 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AL161449.1-201ENST00000414531 1199 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC024082.2-201ENST00000434771 238 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 TRGVB-201ENST00000453257 471 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 snoU13.28-201ENST00000459235 104 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC112518.2-201ENST00000508565 425 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC008494.2-201ENST00000514544 370 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 CYCSP23-201ENST00000519781 313 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 CR383656.7-201ENST00000548164 174 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 MIR4529-201ENST00000578110 78 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 MTCO2P22-201ENST00000603246 681 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC007038.2-201ENST00000608095 740 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC090517.3-201ENST00000625170 141 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 MTND5P31-201ENST00000419366 1374 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 Y_RNA.167-201ENST00000363735 109 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 SNORD82-201ENST00000365530 70 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 MIR676-201ENST00000390702 67 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 CISD1P1-201ENST00000393907 327 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 MTND2P19-201ENST00000449129 1012 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 RNU5F-8P-201ENST00000515941 111 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 RNU6-27P-201ENST00000516146 107 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 SNORA48.10-201ENST00000516965 160 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 MTCYBP23-201ENST00000558717 1102 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms