Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC005336.3-201ENST00000623833 2679 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PTCH1Q13635 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 SET-203ENST00000372688 801 ntTSL 2 BASIC2.68□□□□□ -1.98
PTCH1Q13635 RNU6-114P-201ENST00000384704 105 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 RNU6-754P-201ENST00000391166 107 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 TXNP7-201ENST00000406296 293 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 MIR1284-201ENST00000408337 120 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 RNU2-25P-201ENST00000411041 191 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 RPL19P1-201ENST00000411635 428 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 MTATP6P20-201ENST00000414147 562 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 BX682237.1-201ENST00000415016 335 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AL445685.2-201ENST00000422551 342 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 RPL35AP22-201ENST00000436855 335 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.68□□□□□ -1.98
PTCH1Q13635 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.68□□□□□ -1.98
PTCH1Q13635 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 Y_RNA.717-201ENST00000517106 92 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AP003497.1-201ENST00000528472 562 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.68□□□□□ -1.98
PTCH1Q13635 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.68□□□□□ -1.98
PTCH1Q13635 MTCYBP23-201ENST00000558717 1102 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 RNU4-5P-201ENST00000607255 135 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC140725.3-201ENST00000616193 880 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AL121895.2-201ENST00000619558 447 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC084768.2-201ENST00000622736 221 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.68□□□□□ -1.98
PTCH1Q13635 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PTCH1Q13635 RNU6-223P-201ENST00000362830 107 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 RPL23AP29-201ENST00000397284 453 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AL021407.1-201ENST00000404531 386 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PTCH1Q13635 AL953862.1-201ENST00000423016 168 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC092447.3-201ENST00000426027 686 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 OR10R1P-201ENST00000441524 1141 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.68□□□□□ -1.98
PTCH1Q13635 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
PTCH1Q13635 PAXBP1P1-201ENST00000449315 447 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 ATG12P2-201ENST00000456830 416 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 MEMO1P3-201ENST00000459811 302 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.68□□□□□ -1.98
PTCH1Q13635 RPS15AP34-201ENST00000487776 387 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.68□□□□□ -1.98
PTCH1Q13635 AC020699.1-201ENST00000505161 445 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.68□□□□□ -1.98
PTCH1Q13635 SETP2-201ENST00000553886 926 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.68□□□□□ -1.98
PTCH1Q13635 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.68□□□□□ -1.98
PTCH1Q13635 AC002545.1-201ENST00000592511 181 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC006270.3-201ENST00000605967 1036 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC106052.1-201ENST00000608029 497 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AL161734.1-201ENST00000609720 557 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC079395.3-201ENST00000615161 484 ntBASIC2.68□□□□□ -1.98
PTCH1Q13635 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.68□□□□□ -1.98
PTCH1Q13635 AC027514.1-201ENST00000588561 1603 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PTCH1Q13635 AC092447.10-201ENST00000620607 1652 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PTCH1Q13635 RNU6-217P-201ENST00000384164 104 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 RNU6-432P-201ENST00000384196 109 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 SNORA67.5-201ENST00000391036 107 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 ZNF863P-201ENST00000426746 417 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCH1Q13635 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCH1Q13635 NANOGP2-201ENST00000435391 727 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCH1Q13635 DNAJC19P4-201ENST00000440115 345 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 MTND1P26-201ENST00000440488 538 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.67□□□□□ -1.98
PTCH1Q13635 FGF7P5-201ENST00000441829 291 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCH1Q13635 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.67□□□□□ -1.98
PTCH1Q13635 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.67□□□□□ -1.98
PTCH1Q13635 SNORD11.1-201ENST00000459482 85 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 AC104564.1-201ENST00000493028 407 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCH1Q13635 AC079395.1-201ENST00000510981 262 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 SNORA31.11-201ENST00000516528 139 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 SNORA31.15-201ENST00000516771 132 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 SUB1P1-201ENST00000524415 382 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 COX6CP5-201ENST00000527162 228 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCH1Q13635 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.67□□□□□ -1.98
PTCH1Q13635 ISCA1P3-201ENST00000577104 373 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCH1Q13635 AL450336.1-201ENST00000605180 586 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 AL139344.1-201ENST00000605228 195 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 AC009974.1-201ENST00000608881 455 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PTCH1Q13635 AC010133.1-201ENST00000615809 842 ntBASIC2.67□□□□□ -1.98
PTCH1Q13635 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PTCH1Q13635 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PTCH1Q13635 DDX43P2-201ENST00000604753 1354 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 PABPC1P9-201ENST00000426076 1612 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AL136310.1-201ENST00000404926 654 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 SSR1P2-201ENST00000415208 787 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCH1Q13635 USP9YP24-201ENST00000434374 697 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms