Protein–RNA interactions for Protein: Q12996

CSTF3, Cleavage stimulation factor subunit 3, humanhuman

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3Q12996 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.12□□□□□ -1.91
CSTF3Q12996 AC008739.3-201ENST00000603262 127 ntBASIC3.12□□□□□ -1.91
CSTF3Q12996 MTND4LP5-201ENST00000605152 292 ntBASIC3.12□□□□□ -1.91
CSTF3Q12996 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CSTF3Q12996 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.12□□□□□ -1.91
CSTF3Q12996 AC090617.7-201ENST00000623952 126 ntBASIC3.12□□□□□ -1.91
CSTF3Q12996 AC098679.4-201ENST00000624241 654 ntBASIC3.12□□□□□ -1.91
CSTF3Q12996 AC091903.1-201ENST00000624322 454 ntBASIC3.12□□□□□ -1.91
CSTF3Q12996 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.12□□□□□ -1.91
CSTF3Q12996 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.12□□□□□ -1.91
CSTF3Q12996 MTND4P35-201ENST00000604257 1375 ntBASIC3.12□□□□□ -1.91
CSTF3Q12996 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CSTF3Q12996 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CSTF3Q12996 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.11□□□□□ -1.91
CSTF3Q12996 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSTF3Q12996 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSTF3Q12996 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 Y_RNA.3-201ENST00000362331 103 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 RNU6-1287P-201ENST00000362914 107 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 RNU6-1060P-201ENST00000384664 107 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CSTF3Q12996 MTCO3P40-201ENST00000392516 676 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CSTF3Q12996 AC068050.1-201ENST00000394891 380 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 RPS4XP8-201ENST00000402039 771 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 SNORA11-201ENST00000408789 128 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.11□□□□□ -1.91
CSTF3Q12996 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSTF3Q12996 AL160275.3-201ENST00000423876 471 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.11□□□□□ -1.91
CSTF3Q12996 AC005019.1-201ENST00000436455 431 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AL714022.1-201ENST00000439897 151 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 CYCSP35-201ENST00000451978 304 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AC104472.2-201ENST00000469035 601 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 RN7SL283P-201ENST00000489055 303 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AC139453.3-201ENST00000493276 369 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.11□□□□□ -1.91
CSTF3Q12996 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.11□□□□□ -1.91
CSTF3Q12996 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.11□□□□□ -1.91
CSTF3Q12996 AC007458.1-201ENST00000542812 373 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AL157871.3-201ENST00000557231 293 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 H3F3AP1-201ENST00000559984 334 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 EIF1P4-201ENST00000572664 335 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CSTF3Q12996 AC126118.1-201ENST00000607744 628 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AL591516.1-201ENST00000611326 274 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AC004852.3-201ENST00000614131 326 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.11□□□□□ -1.91
CSTF3Q12996 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AC011155.2-201ENST00000623202 216 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AC139792.3-201ENST00000623525 224 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AP003122.6-201ENST00000623831 495 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 AC005609.4-201ENST00000625071 447 ntBASIC3.11□□□□□ -1.91
CSTF3Q12996 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSTF3Q12996 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
CSTF3Q12996 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
CSTF3Q12996 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
CSTF3Q12996 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSTF3Q12996 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSTF3Q12996 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
CSTF3Q12996 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.11□□□□□ -1.91
CSTF3Q12996 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CSTF3Q12996 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.11□□□□□ -1.91
CSTF3Q12996 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CSTF3Q12996 AC093908.1-201ENST00000623125 8092 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSTF3Q12996 OR4G2P-201ENST00000328113 903 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 SNORA71.3-201ENST00000362582 128 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 RNU1-33P-201ENST00000364249 162 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 CD24P4-201ENST00000382840 243 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 Y_RNA.409-201ENST00000383990 98 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 RNU6-1029P-201ENST00000384109 107 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 MIR23B-201ENST00000384832 97 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 MIR490-201ENST00000384865 128 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 RN7SKP123-201ENST00000410732 291 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 AC063979.1-201ENST00000415539 377 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 AL353193.1-201ENST00000421444 268 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 AL158156.1-201ENST00000422509 473 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.1□□□□□ -1.91
CSTF3Q12996 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.1□□□□□ -1.91
CSTF3Q12996 MTND1P34-201ENST00000438556 671 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 MTND1P18-201ENST00000448191 573 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 RPL37P4-201ENST00000448908 268 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 PSPHP1-201ENST00000450062 261 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.1□□□□□ -1.91
CSTF3Q12996 AC027673.1-201ENST00000456245 405 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 RNU7-63P-201ENST00000459054 62 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.1□□□□□ -1.91
CSTF3Q12996 AC098591.2-201ENST00000510152 315 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 RNU1-103P-201ENST00000516502 125 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 RNU6-506P-201ENST00000516553 94 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 RNU6-685P-201ENST00000517088 95 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.1□□□□□ -1.91
CSTF3Q12996 OR5BN1P-201ENST00000532955 829 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 AP003034.1-201ENST00000534621 422 ntBASIC3.1□□□□□ -1.91
CSTF3Q12996 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
CSTF3Q12996 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.1□□□□□ -1.91
CSTF3Q12996 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.1□□□□□ -1.91
CSTF3Q12996 HMGN2P15-201ENST00000585707 270 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms