Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 USP12PX-201ENST00000432383 1057 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC010153.1-201ENST00000432862 727 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC020550.1-201ENST00000447385 163 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 EEF1B2P7-201ENST00000451177 676 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 RPL12P25-201ENST00000455592 494 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HMGCS1Q01581 SUMO2P6-201ENST00000505273 288 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC118465.1-201ENST00000513820 1271 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 RNU6-1129P-201ENST00000515964 104 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 SNORA31.11-201ENST00000516528 139 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 RNU6-678P-201ENST00000516832 109 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 SNORA31.18-201ENST00000517043 134 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 PRELID2P1-201ENST00000552837 301 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 MYL12BP1-201ENST00000569826 507 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC136601.2-201ENST00000604356 474 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC108747.1-201ENST00000609508 535 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 OR10AB1P-201ENST00000609613 938 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AC087683.2-201ENST00000611384 326 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 MIR7515-201ENST00000637837 67 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AL137003.2-201ENST00000606924 2538 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
HMGCS1Q01581 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HMGCS1Q01581 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 RNU6-809P-201ENST00000384461 107 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AL359634.1-202ENST00000404721 284 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC107081.1-201ENST00000414975 361 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 BTF3L4P3-201ENST00000418879 476 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HMGCS1Q01581 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC244035.1-201ENST00000430042 390 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 RPL37P21-201ENST00000435890 276 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 RNU7-26P-201ENST00000458980 63 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC107626.1-201ENST00000471084 183 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC128713.1-201ENST00000471495 306 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC138853.1-201ENST00000503549 823 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 RPL23AP94-201ENST00000512518 302 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 MTND5P13-201ENST00000513046 1079 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC114797.1-201ENST00000514003 728 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 RNA5SP281-201ENST00000516504 135 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 DEFB108A-201ENST00000530110 222 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC123904.2-201ENST00000548059 300 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AL512310.1-201ENST00000548639 172 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC012435.1-202ENST00000568772 240 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AL356432.3-201ENST00000568952 465 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC112187.2-201ENST00000604345 283 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AL161729.4-201ENST00000604650 476 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC007938.3-201ENST00000604965 623 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 AC131159.1-201ENST00000621854 213 ntBASIC2.15□□□□□ -2.07
HMGCS1Q01581 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HMGCS1Q01581 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HMGCS1Q01581 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HMGCS1Q01581 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HMGCS1Q01581 RNU6-500P-201ENST00000362349 107 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 RNU5A-8P-201ENST00000364102 114 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 RN7SKP226-201ENST00000364912 300 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 MIR221-201ENST00000385135 110 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 RNU6-278P-201ENST00000390945 109 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 RPS27AP14-201ENST00000422868 454 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 TIMM9P1-201ENST00000436122 256 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 MTCYBP39-201ENST00000437562 491 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 RPS29P20-201ENST00000489592 171 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 GZMAP1-201ENST00000503054 631 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 NDUFB4P2-201ENST00000509515 391 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 RNU6-1003P-201ENST00000517099 105 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 AC093012.1-202ENST00000549403 582 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 AL391261.3-201ENST00000557194 520 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 MIR3616-201ENST00000584070 92 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms