Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.53□□□□□ -2.16
HOXC5Q00444 RPS3AP44-201ENST00000425466 790 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 GTF2IP7-202ENST00000436677 309 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
HOXC5Q00444 PTGES3P1-201ENST00000439531 483 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXC5Q00444 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXC5Q00444 PMCHL2-203ENST00000457791 237 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXC5Q00444 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXC5Q00444 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXC5Q00444 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXC5Q00444 MTCYBP16-201ENST00000509187 1129 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.53□□□□□ -2.16
HOXC5Q00444 AF213884.2-201ENST00000510417 903 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
HOXC5Q00444 SMURF2P1-201ENST00000514992 481 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 RNU6-390P-201ENST00000516259 103 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 RNA5SP165-201ENST00000517142 115 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 RNU2-19P-201ENST00000517288 84 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 OR8K2P-201ENST00000524645 927 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC006199.1-201ENST00000548728 219 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.53□□□□□ -2.16
HOXC5Q00444 AC104072.1-201ENST00000568817 668 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXC5Q00444 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.53□□□□□ -2.16
HOXC5Q00444 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXC5Q00444 AC025165.5-201ENST00000602802 578 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC068276.1-201ENST00000605793 379 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC004908.2-201ENST00000609090 574 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC022202.1-201ENST00000613515 211 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AL512506.1-201ENST00000613918 449 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC009268.2-201ENST00000621925 457 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 AC109454.4-201ENST00000623411 649 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HOXC5Q00444 MTND5P30-201ENST00000452896 1731 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 MTND4P23-201ENST00000447723 1363 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 RNU6-359P-201ENST00000365466 108 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.52□□□□□ -2.17
HOXC5Q00444 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.52□□□□□ -2.17
HOXC5Q00444 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.52□□□□□ -2.17
HOXC5Q00444 MTND4P6-201ENST00000438297 472 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AL161651.1-201ENST00000440882 223 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 MTCYBP42-201ENST00000444653 1130 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.52□□□□□ -2.17
HOXC5Q00444 ARPC3P5-201ENST00000448802 534 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 RPL18AP17-201ENST00000455326 198 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 RPL7P18-201ENST00000478965 734 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC069528.1-202ENST00000482888 637 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC093801.2-201ENST00000503966 1050 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC020699.1-201ENST00000505161 445 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HOXC5Q00444 AC093281.2-201ENST00000510153 597 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HOXC5Q00444 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.52□□□□□ -2.17
HOXC5Q00444 AC118273.2-201ENST00000532092 465 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.52□□□□□ -2.17
HOXC5Q00444 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.52□□□□□ -2.17
HOXC5Q00444 AC087897.1-201ENST00000550134 156 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 SNRPGP1-201ENST00000553864 222 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.52□□□□□ -2.17
HOXC5Q00444 AC073544.2-201ENST00000601155 540 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AL138963.2-201ENST00000605137 226 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC068944.2-201ENST00000610373 403 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AL356094.1-201ENST00000624663 1212 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC091948.2-201ENST00000636510 279 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AC006927.2-201ENST00000639256 389 ntBASIC1.52□□□□□ -2.17
HOXC5Q00444 AL359854.1-201ENST00000614203 1594 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HOXC5Q00444 Z98749.2-208ENST00000381646 500 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 RNU6-432P-201ENST00000384196 109 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 MIR504-201ENST00000385065 83 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 MIR147B-201ENST00000390185 80 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AL590084.2-201ENST00000401481 382 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AL356421.1-201ENST00000403255 413 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 U6atac.2-201ENST00000408644 118 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 RPL26P27-201ENST00000414397 437 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AC007435.1-201ENST00000421086 415 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 ELOCP14-201ENST00000428070 331 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.51□□□□□ -2.17
HOXC5Q00444 ELOCP7-201ENST00000439968 331 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 MTATP6P30-201ENST00000443540 664 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 RPL7P12-201ENST00000446719 750 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXC5Q00444 RPL21P134-201ENST00000453468 483 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.51□□□□□ -2.17
HOXC5Q00444 AC107032.1-201ENST00000485945 480 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 RPS15AP36-201ENST00000492022 382 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HOXC5Q00444 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXC5Q00444 AC008526.1-201ENST00000509149 338 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXC5Q00444 RNU6-150P-201ENST00000516237 95 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 RNU6-250P-201ENST00000516958 103 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.51□□□□□ -2.17
HOXC5Q00444 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.51□□□□□ -2.17
HOXC5Q00444 NACAP3-201ENST00000552100 481 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AC021739.1-201ENST00000559631 174 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms