Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.53□□□□□ -2.33
PRKDCP78527 RPS24P6-201ENST00000452670 400 ntBASIC0.53□□□□□ -2.33
PRKDCP78527 SYPL1P1-201ENST00000473622 768 ntBASIC0.53□□□□□ -2.33
PRKDCP78527 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.53□□□□□ -2.33
PRKDCP78527 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.53□□□□□ -2.33
PRKDCP78527 AC025594.3-201ENST00000613068 790 ntBASIC0.53□□□□□ -2.33
PRKDCP78527 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
PRKDCP78527 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.52□□□□□ -2.33
PRKDCP78527 SETP11-201ENST00000473027 690 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AP006587.4-201ENST00000526053 529 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AC005786.1-201ENST00000588553 154 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AC025165.5-201ENST00000602802 578 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AC079791.1-201ENST00000605356 973 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AC007038.2-201ENST00000608095 740 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AL355810.1-201ENST00000614629 552 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.52□□□□□ -2.33
PRKDCP78527 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.52□□□□□ -2.33
PRKDCP78527 AC008555.8-201ENST00000623602 2168 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PRKDCP78527 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PRKDCP78527 RPS3AP24-201ENST00000407896 734 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.52□□□□□ -2.33
PRKDCP78527 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.52□□□□□ -2.33
PRKDCP78527 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PRKDCP78527 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PRKDCP78527 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.52□□□□□ -2.33
PRKDCP78527 COL6A4P2-205ENST00000509855 506 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PRKDCP78527 SNORA48.11-201ENST00000517015 89 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.52□□□□□ -2.33
PRKDCP78527 VN1R81P-201ENST00000602085 372 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AC087045.1-201ENST00000605856 382 ntBASIC0.52□□□□□ -2.33
PRKDCP78527 AC092745.2-202ENST00000411880 369 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 AL356379.1-201ENST00000414105 126 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 MTATP6P7-201ENST00000453315 681 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.51□□□□□ -2.33
PRKDCP78527 EIF4A1P12-201ENST00000551910 141 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.51□□□□□ -2.33
PRKDCP78527 AC007785.2-201ENST00000598627 1916 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 RNU6-1072P-201ENST00000384703 107 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 RNU6-443P-201ENST00000384780 107 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 RNA5SP252-201ENST00000391131 119 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 RNA5SP25-201ENST00000410815 110 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 AL591704.2-201ENST00000421658 181 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 RPS6P14-201ENST00000425165 719 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.51□□□□□ -2.33
PRKDCP78527 AC005410.1-202ENST00000460347 485 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.51□□□□□ -2.33
PRKDCP78527 CYCSP2-201ENST00000558168 301 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
PRKDCP78527 AC113194.1-201ENST00000606037 500 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 AP003485.1-201ENST00000625093 753 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 AC091812.1-201ENST00000432235 1948 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
PRKDCP78527 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.51□□□□□ -2.33
PRKDCP78527 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.51□□□□□ -2.33
PRKDCP78527 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
PRKDCP78527 BX248409.1-201ENST00000455497 255 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.51□□□□□ -2.33
PRKDCP78527 MIR6718-201ENST00000616153 80 ntBASIC0.51□□□□□ -2.33
PRKDCP78527 U8.3-201ENST00000363321 132 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 PTGES3P2-201ENST00000407942 482 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AC004022.2-201ENST00000413824 193 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AC098614.2-201ENST00000426040 255 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 OSTCP8-201ENST00000445117 448 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 RPS20P20-201ENST00000460498 340 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.5□□□□□ -2.33
PRKDCP78527 SNORA48.10-201ENST00000516965 160 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.5□□□□□ -2.33
PRKDCP78527 AL355472.4-201ENST00000610233 626 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 MIR6864-201ENST00000617935 70 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.5□□□□□ -2.33
PRKDCP78527 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
PRKDCP78527 OR4G2P-201ENST00000328113 903 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 RNU6-19P-201ENST00000384718 107 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.5□□□□□ -2.33
PRKDCP78527 MTCO3P46-201ENST00000425787 232 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.5□□□□□ -2.33
PRKDCP78527 RPS27P23-201ENST00000487608 251 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.5□□□□□ -2.33
PRKDCP78527 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.5□□□□□ -2.33
PRKDCP78527 FAM60BP-201ENST00000578364 658 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.5□□□□□ -2.33
PRKDCP78527 snoU13.28-201ENST00000459235 104 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AC087884.1-201ENST00000469738 328 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 RPS27P26-201ENST00000494583 239 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 PCNAP1-201ENST00000505363 709 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.5□□□□□ -2.33
PRKDCP78527 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.5□□□□□ -2.33
PRKDCP78527 AC023932.2-201ENST00000603176 175 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 AL138880.2-201ENST00000616214 239 ntBASIC0.5□□□□□ -2.33
PRKDCP78527 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.49□□□□□ -2.33
PRKDCP78527 RNU6-939P-201ENST00000384634 107 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 RNU6-955P-201ENST00000410497 104 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 RPS15AP40-201ENST00000419621 391 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.49□□□□□ -2.33
PRKDCP78527 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms