Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AL691517.1-201ENST00000440833 1235 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.05□□□□□ -2.24
ABCA4P78363 AL121769.1-201ENST00000469473 401 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AC138853.1-201ENST00000503549 823 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.05□□□□□ -2.24
ABCA4P78363 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.05□□□□□ -2.24
ABCA4P78363 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.05□□□□□ -2.24
ABCA4P78363 OR5AL2P-201ENST00000532185 920 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.05□□□□□ -2.24
ABCA4P78363 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AL031176.1-201ENST00000604554 466 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ABCA4P78363 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
ABCA4P78363 RNA5SP257-201ENST00000363023 116 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 RNA5SP62-201ENST00000363457 110 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
ABCA4P78363 TAF9BP2-201ENST00000400856 499 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 U6atac.2-201ENST00000408644 118 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 AC096649.2-201ENST00000416186 393 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 AC012497.1-201ENST00000429392 575 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 AC098934.3-201ENST00000430450 190 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.04□□□□□ -2.24
ABCA4P78363 AC093801.2-201ENST00000503966 1050 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ABCA4P78363 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.04□□□□□ -2.24
ABCA4P78363 MTCYBP23-201ENST00000558717 1102 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ABCA4P78363 AC008498.1-201ENST00000613012 531 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
ABCA4P78363 RNU6-1035P-201ENST00000384477 107 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 HMGB1P49-201ENST00000418882 569 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.04□□□□□ -2.24
ABCA4P78363 MTCO3P2-201ENST00000457365 171 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.04□□□□□ -2.24
ABCA4P78363 DUXAP5-201ENST00000529668 529 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 AC138473.1-201ENST00000605717 526 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 AC098657.3-201ENST00000620434 263 ntBASIC1.04□□□□□ -2.24
ABCA4P78363 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA4P78363 MIR525-201ENST00000384978 85 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 RNA5SP450-201ENST00000411206 102 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 AL030996.1-201ENST00000411430 235 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 RPS3AP44-201ENST00000425466 790 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 RPL30P4-201ENST00000429309 333 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 RPS15AP5-201ENST00000436276 388 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 THAP5P1-201ENST00000439089 262 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.03□□□□□ -2.24
ABCA4P78363 RAC1P7-201ENST00000445367 377 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.03□□□□□ -2.24
ABCA4P78363 KATNBL1P4-201ENST00000503545 918 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.03□□□□□ -2.24
ABCA4P78363 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.03□□□□□ -2.24
ABCA4P78363 AP005639.2-201ENST00000527592 928 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 SUMO2P14-201ENST00000604488 293 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 AC040168.1-201ENST00000623594 991 ntBASIC1.03□□□□□ -2.24
ABCA4P78363 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ABCA4P78363 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
ABCA4P78363 Y_RNA.274-201ENST00000364714 101 ntBASIC1.03□□□□□ -2.25
ABCA4P78363 RNU6-928P-201ENST00000516876 104 ntBASIC1.03□□□□□ -2.25
ABCA4P78363 RNU6-889P-201ENST00000517189 103 ntBASIC1.03□□□□□ -2.25
ABCA4P78363 SETP7-201ENST00000552169 453 ntBASIC1.03□□□□□ -2.25
ABCA4P78363 MIR3122-201ENST00000577243 73 ntBASIC1.03□□□□□ -2.25
ABCA4P78363 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
ABCA4P78363 AC091925.2-201ENST00000625059 256 ntBASIC1.03□□□□□ -2.25
ABCA4P78363 SEC63P2-201ENST00000503863 1939 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
ABCA4P78363 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
ABCA4P78363 RNU1-72P-201ENST00000362976 153 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 RNA5SP457-201ENST00000363657 124 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 RNU6-441P-201ENST00000384545 106 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AL356432.1-201ENST00000405809 419 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 Z86062.1-201ENST00000406773 777 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA4P78363 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA4P78363 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ABCA4P78363 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA4P78363 AC092902.1-201ENST00000486999 259 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AF213884.2-201ENST00000510417 903 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA4P78363 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA4P78363 HIGD1AP6-201ENST00000521833 279 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA4P78363 DUXAP1-201ENST00000556632 463 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AC005034.5-201ENST00000604219 466 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AL450336.1-201ENST00000605180 586 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AC080013.4-201ENST00000607624 649 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AC004908.2-201ENST00000609090 574 ntBASIC1.02□□□□□ -2.25
ABCA4P78363 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.02□□□□□ -2.25
ABCA4P78363 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
ABCA4P78363 Y_RNA.433-201ENST00000384089 102 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC016769.3-201ENST00000396562 315 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms