Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.53□□□□□ -1.68
RTP1P59025 MIR4298-201ENST00000584380 73 ntBASIC4.53□□□□□ -1.68
RTP1P59025 AC092447.9-201ENST00000603395 144 ntBASIC4.53□□□□□ -1.68
RTP1P59025 MIR6868-201ENST00000611215 58 ntBASIC4.53□□□□□ -1.68
RTP1P59025 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP1P59025 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP1P59025 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTP1P59025 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTP1P59025 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
RTP1P59025 AC091812.1-201ENST00000432235 1948 ntBASIC4.52□□□□□ -1.69
RTP1P59025 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTP1P59025 Z82217.1-201ENST00000625157 8149 ntBASIC4.52□□□□□ -1.69
RTP1P59025 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTP1P59025 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP1P59025 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RTP1P59025 SNORD74.4-201ENST00000364129 80 ntBASIC4.52□□□□□ -1.69
RTP1P59025 RNU6-99P-201ENST00000364721 107 ntBASIC4.52□□□□□ -1.69
RTP1P59025 Y_RNA.485-201ENST00000384395 102 ntBASIC4.52□□□□□ -1.69
RTP1P59025 RNU6-1109P-201ENST00000391187 107 ntBASIC4.52□□□□□ -1.69
RTP1P59025 RPS4XP7-201ENST00000406274 780 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AC092809.3-201ENST00000415453 231 ntBASIC4.52□□□□□ -1.69
RTP1P59025 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.52□□□□□ -1.69
RTP1P59025 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP1P59025 AL359672.1-201ENST00000442302 409 ntBASIC4.52□□□□□ -1.69
RTP1P59025 IFNWP4-201ENST00000453148 294 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AL583843.1-201ENST00000456070 346 ntBASIC4.52□□□□□ -1.69
RTP1P59025 RN7SL271P-201ENST00000487601 295 ntBASIC4.52□□□□□ -1.69
RTP1P59025 RPL29P14-201ENST00000495837 428 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP1P59025 AC096745.1-201ENST00000509945 370 ntBASIC4.52□□□□□ -1.69
RTP1P59025 Y_RNA.668-201ENST00000516233 93 ntBASIC4.52□□□□□ -1.69
RTP1P59025 RNU6-352P-201ENST00000516908 107 ntBASIC4.52□□□□□ -1.69
RTP1P59025 IGKV2D-19-201ENST00000523346 262 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP1P59025 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP1P59025 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP1P59025 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.52□□□□□ -1.69
RTP1P59025 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.52□□□□□ -1.69
RTP1P59025 IGHV3-29-201ENST00000604817 344 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AC107871.2-201ENST00000612894 502 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AL161423.1-201ENST00000613700 262 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AL359547.2-201ENST00000615810 418 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AC243312.2-201ENST00000623340 601 ntBASIC4.52□□□□□ -1.69
RTP1P59025 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RTP1P59025 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.52□□□□□ -1.69
RTP1P59025 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.52□□□□□ -1.69
RTP1P59025 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RTP1P59025 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RTP1P59025 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RTP1P59025 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RTP1P59025 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RTP1P59025 AL049555.1-201ENST00000562834 1933 ntBASIC4.51□□□□□ -1.69
RTP1P59025 Y_RNA.2-201ENST00000362330 96 ntBASIC4.51□□□□□ -1.69
RTP1P59025 RNA5SP72-201ENST00000364442 117 ntBASIC4.51□□□□□ -1.69
RTP1P59025 RNU6-450P-201ENST00000364654 107 ntBASIC4.51□□□□□ -1.69
RTP1P59025 MIR183-201ENST00000384958 110 ntBASIC4.51□□□□□ -1.69
RTP1P59025 RPL21P17-201ENST00000397467 475 ntBASIC4.51□□□□□ -1.69
RTP1P59025 RNA5SP56-201ENST00000410277 118 ntBASIC4.51□□□□□ -1.69
RTP1P59025 AL391219.1-201ENST00000422570 483 ntBASIC4.51□□□□□ -1.69
RTP1P59025 PSMA2P3-201ENST00000429685 675 ntBASIC4.51□□□□□ -1.69
RTP1P59025 AL358472.1-201ENST00000431295 329 ntBASIC4.51□□□□□ -1.69
RTP1P59025 AL591704.1-201ENST00000432574 275 ntBASIC4.51□□□□□ -1.69
RTP1P59025 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.51□□□□□ -1.69
RTP1P59025 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.51□□□□□ -1.69
RTP1P59025 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.51□□□□□ -1.69
RTP1P59025 AL451050.1-201ENST00000450126 415 ntBASIC4.51□□□□□ -1.69
RTP1P59025 HMGB3P30-201ENST00000457863 606 ntBASIC4.51□□□□□ -1.69
RTP1P59025 RPL37P6-202ENST00000464216 403 ntBASIC4.51□□□□□ -1.69
RTP1P59025 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.51□□□□□ -1.69
RTP1P59025 VWA8P1-201ENST00000510889 176 ntBASIC4.51□□□□□ -1.69
RTP1P59025 AC074250.1-201ENST00000511117 192 ntBASIC4.51□□□□□ -1.69
RTP1P59025 AP005902.1-201ENST00000521358 186 ntBASIC4.51□□□□□ -1.69
RTP1P59025 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.51□□□□□ -1.69
RTP1P59025 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.51□□□□□ -1.69
RTP1P59025 AC011471.1-201ENST00000585766 187 ntBASIC4.51□□□□□ -1.69
RTP1P59025 AC174048.1-201ENST00000603389 144 ntBASIC4.51□□□□□ -1.69
RTP1P59025 AC007619.2-201ENST00000605743 379 ntBASIC4.51□□□□□ -1.69
RTP1P59025 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RTP1P59025 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RTP1P59025 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.51□□□□□ -1.69
RTP1P59025 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.51□□□□□ -1.69
RTP1P59025 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RTP1P59025 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.51□□□□□ -1.69
RTP1P59025 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RTP1P59025 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RTP1P59025 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RTP1P59025 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.5□□□□□ -1.69
RTP1P59025 Y_RNA.307-201ENST00000365022 117 ntBASIC4.5□□□□□ -1.69
RTP1P59025 Y_RNA.512-201ENST00000384518 102 ntBASIC4.5□□□□□ -1.69
RTP1P59025 MIR135A2-201ENST00000384854 100 ntBASIC4.5□□□□□ -1.69
RTP1P59025 MIR634-201ENST00000385208 97 ntBASIC4.5□□□□□ -1.69
RTP1P59025 RNU6-823P-201ENST00000391042 103 ntBASIC4.5□□□□□ -1.69
RTP1P59025 NDUFB4P4-201ENST00000404822 243 ntBASIC4.5□□□□□ -1.69
RTP1P59025 Z92545.1-201ENST00000411782 234 ntBASIC4.5□□□□□ -1.69
RTP1P59025 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.5□□□□□ -1.69
RTP1P59025 SAGE2P-201ENST00000420011 2126 ntBASIC4.5□□□□□ -1.69
RTP1P59025 AC099677.1-201ENST00000420575 175 ntBASIC4.5□□□□□ -1.69
RTP1P59025 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.5□□□□□ -1.69
RTP1P59025 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms